RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 PDXDC1Q6P996 788 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 PNMA8AQ86V59 439 aaPredicted RBP16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CELF4Q9BZC1 486 aaKnown RBP16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TMEM260Q9NX78 707 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SAP30BPQ9UHR5 308 aaKnown RBP16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 FBXL5Q9UKA1 691 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 GMNCA6NCL1 334 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 EIF4E1BA6NMX2 242 aaKnown RBP16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 NEBLO76041 1014 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 GBP2P32456 591 aaPredicted RBP16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CCDC84Q86UT8 332 aaPredicted RBP16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 GDF3Q9NR23 364 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 AMACRQ9UHK6 382 aa16.43■□□□□ 0.22
SH3PXD2A-204ENST00000420222 KIF13AQ9H1H9 1805 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 DAPK3O43293 454 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 COPB2P35606 906 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 AMPD3Q01432 767 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 PPP2R5AQ15172 486 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 PPP1R7Q15435 360 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CYB5D1Q6P9G0 228 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 PARP9Q8IXQ6 854 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 LRRC4CQ9HCJ2 640 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 HMGB1P1B2RPK0 211 aaPredicted RBP16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CDC25CP30307 473 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 RPS6KA1Q15418 735 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ZNF662Q6ZS27 426 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CACNA2D3Q8IZS8 1091 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 OSBPL7Q9BZF2 842 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 NEUROG2Q9H2A3 272 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 VEZTQ9HBM0 779 aa16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 DCP1AQ9NPI6 582 aaPredicted RBP16.42■□□□□ 0.22
SH3PXD2A-204ENST00000420222 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 BAP1Q92560 729 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CNOT8Q9UFF9 292 aaKnown RBP16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ATP8A1Q9Y2Q0 1164 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CLTAP09496 248 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 MECOMQ03112 1051 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 HIBCHQ6NVY1 386 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ZNF384Q8TF68 577 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ACTN1P12814 892 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ITGA4P13612 1032 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 PAX7P23759 505 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SEC16BQ96JE7 1060 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TSG101Q99816 390 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ANAPC4Q9UJX5 808 aa16.41■□□□□ 0.22
SH3PXD2A-204ENST00000420222 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CYTH3O43739 400 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 CYP19A1P11511 503 aaPredicted RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 EZRP15311 586 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 PRLRP16471 622 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 IFNAR2P48551 515 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SOGA3Q5TF21 947 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ARFGAP2Q8N6H7 521 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 MTA3Q9BTC8 594 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 UBA5Q9GZZ9 404 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TPX2Q9ULW0 747 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 KRIT1O00522 736 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TLR2O60603 784 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SMTNP53814 917 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 FAM133BQ5BKY9 247 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 RCSD1Q6JBY9 416 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 RPAINQ86UA6 219 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 TAX1BP1Q86VP1 789 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SPATS2Q86XZ4 545 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 SNX29Q8TEQ0 813 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 WHAMMQ8TF30 809 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 LUC7LQ9NQ29 371 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 FLT1P17948 1338 aa16.4■□□□□ 0.22
SH3PXD2A-204ENST00000420222 DHX9Q08211 1270 aaKnown RBP16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 ZNF844Q08AG5 666 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 USP17L2Q6R6M4 530 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 RAPGEF5Q92565 580 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 TMBIM4Q9HC24 238 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 DONSONQ9NYP3 566 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 A6NNZ2 444 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 RAD21O60216 631 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 PSEN1P49768 467 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 NONOQ15233 471 aaKnown RBP eCLIP16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 CDC37Q16543 378 aaPredicted RBP16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 TUBB8Q3ZCM7 444 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 GLE1Q53GS7 698 aaKnown RBP16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
SH3PXD2A-204ENST00000420222 MARCH10Q8NA82 808 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms