RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 RAPGEFL1Q9UHV5 662 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 MYH6P13533 1939 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 KIAA1217Q5T5P2 1943 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 GCOM1H8Y6P7 765 aaPredicted RBP18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 NOP56O00567 594 aaKnown RBP18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 NBNO60934 754 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 LGR5O75473 907 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 CXCL10P02778 98 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 POLR2MP0CAP2 368 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 THPOP40225 353 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 GNPTABQ3T906 1256 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 FCHSD1Q86WN1 690 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 STAG2Q8N3U4 1231 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 SAMD3Q8N6K7 520 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 COL4A4P53420 1690 aaPredicted RBP18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 MYO9BQ13459 2157 aa18.06■□□□□ 0.48
SBDSP1-201ENST00000415772 TCF20Q9UGU0 1960 aaKnown RBP18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 C17orf102A2RUQ5 167 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 RSPH10BP0C881 870 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 TGFB3P10600 412 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 NUCB1Q02818 461 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 SART3Q15020 963 aaKnown RBP18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 PGM5Q15124 567 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 CELF3Q5SZQ8 465 aaKnown RBP18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 MYSM1Q5VVJ2 828 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 MYOCDQ8IZQ8 938 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 CTAGE1Q96RT6 745 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 HCN4Q9Y3Q4 1203 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 INSL6Q9Y581 213 aa18.05■□□□□ 0.48
SBDSP1-201ENST00000415772 HAS3O00219 553 aa18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 ZNF200P98182 395 aaPredicted RBP18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 HSDL1Q3SXM5 330 aa18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 STOX1Q6ZVD7 989 aa18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 SPRED2Q7Z698 418 aa18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 RALYLQ86SE5 291 aaKnown RBP18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 FBXO22Q8NEZ5 403 aa18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 ATP6V0A1Q93050 837 aa18.04■□□□□ 0.48
SBDSP1-201ENST00000415772 LINC01553A4QN01 128 aa18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 IFIT3O14879 490 aaKnown RBP18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 GNAT1P11488 350 aa18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 ERVK-21P61565 698 aa18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 VSIG10LQ86VR7 867 aa18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 RUFY2Q8WXA3 655 aa18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 SUGCTQ9HAC7 445 aa18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 MAD2L2Q9UI95 211 aa18.03■□□□□ 0.48
SBDSP1-201ENST00000415772 TRIP12Q14669 1992 aaPredicted RBP18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 H3BRB1 525 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 UBA1P22314 1058 aaKnown RBP18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 PLA2G5P39877 138 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 GPNMBQ14956 572 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 PTPROQ16827 1216 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 TMEM31Q5JXX7 168 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 DBF4BQ8NFT6 615 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 SEPT8Q92599 483 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 ZFP91Q96JP5 570 aaPredicted RBP18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 PIGSQ96S52 555 aa18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 TUT1Q9H6E5 874 aaKnown RBP18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
SBDSP1-201ENST00000415772 TTC28Q96AY4 2481 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 OPLAHO14841 1288 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 LPXNO60711 386 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 GHRHRQ02643 423 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 WTAPQ15007 396 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 TRIM71Q2Q1W2 868 aaKnown RBP18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 SERINC5Q86VE9 423 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 CUL5Q93034 780 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 SAMD11Q96NU1 681 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 UBE2ZQ9H832 354 aaPredicted RBP18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 ZNF215Q9UL58 517 aaPredicted RBP18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 PTPRSQ13332 1948 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 CHD7Q9P2D1 2997 aa18.01■□□□□ 0.47
SBDSP1-201ENST00000415772 PALM3A6NDB9 673 aaPredicted RBP18■□□□□ 0.47
SBDSP1-201ENST00000415772 PPP1R11O60927 126 aaPredicted RBP18■□□□□ 0.47
SBDSP1-201ENST00000415772 STAM2O75886 525 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 UPP2O95045 317 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 LGALS2P05162 132 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 CTSHP09668 335 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 SMIM10L2AP0DMW4 78 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 SMIM10L2BP0DMW5 78 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 NEDD9Q14511 834 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 SEC23AQ15436 765 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18■□□□□ 0.47
SBDSP1-201ENST00000415772 EP400NLQ6ZTU2 488 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 CYB5R4Q7L1T6 521 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 CATIPQ7Z7H3 387 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 IL31RAQ8NI17 732 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 PIBF1Q8WXW3 757 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 WNT8BQ93098 351 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 MTMR8Q96EF0 704 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 USP26Q9BXU7 913 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 MYH7BA7E2Y1 1941 aa18■□□□□ 0.47
SBDSP1-201ENST00000415772 PNMA6FA0A0J9YX94 578 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 RGS20O76081 388 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 IGHDP01880 384 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 HOXD8P13378 290 aaPredicted RBP17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 KCNA5P22460 613 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms