RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ARP10275 920 aa34.79■■■■□ 3.16
CSNK1E-206ENST00000413574 CIITAP33076 1130 aa34.79■■■■□ 3.16
CSNK1E-206ENST00000413574 MTMR1Q13613 665 aa34.79■■■■□ 3.16
CSNK1E-206ENST00000413574 DDX41Q9UJV9 622 aaKnown RBP34.79■■■■□ 3.16
CSNK1E-206ENST00000413574 SPATA31C2B4DYI2 1134 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 MEIS1O00470 390 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 SORBS3O60504 671 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 DUSP28Q4G0W2 176 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 PRR16Q569H4 304 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 GPRASP2Q96D09 838 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 BCAS3Q9H6U6 928 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 PKD2L1Q9P0L9 805 aa34.78■■■■□ 3.16
CSNK1E-206ENST00000413574 FIBPO43427 364 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 ATP2B1P20020 1258 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 ICAM3P32942 547 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 PLA2G4DQ86XP0 818 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 KCNH7Q9NS40 1196 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 GNEQ9Y223 722 aaKnown RBP34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 RARBP10826 455 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 IRX5P78411 483 aaPredicted RBP34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 PKP1Q13835 747 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 LENG9Q96B70 501 aa34.77■■■■□ 3.16
CSNK1E-206ENST00000413574 KIAA0100Q14667 2235 aaKnown RBP34.76■■■■□ 3.16
CSNK1E-206ENST00000413574 CCNT1O60563 726 aaKnown RBP34.76■■■■□ 3.15
CSNK1E-206ENST00000413574 ATP9AO75110 1047 aa34.76■■■■□ 3.15
CSNK1E-206ENST00000413574 DUSP11O75319 330 aaKnown RBP34.75■■■■□ 3.15
CSNK1E-206ENST00000413574 GJB1P08034 283 aa34.75■■■■□ 3.15
CSNK1E-206ENST00000413574 UBA1P22314 1058 aaKnown RBP34.75■■■■□ 3.15
CSNK1E-206ENST00000413574 CYP3A7-CYP3A51PA0A087WV96 503 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 POTEFA5A3E0 1075 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 MSCO60682 206 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 PGK1P00558 417 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 CYP3A7P24462 503 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 NIPA1Q7RTP0 329 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 TMEM106CQ9BVX2 250 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 XPNPEP3Q9NQH7 507 aa34.74■■■■□ 3.15
CSNK1E-206ENST00000413574 DYNC1LI2O43237 492 aaPredicted RBP34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 SLC37A4O43826 429 aa34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 TGFB3P10600 412 aa34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 FOXD4L5Q5VV16 416 aaPredicted RBP34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 KCNV1Q6PIU1 500 aa34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 U2AF1L4Q8WU68 220 aaKnown RBP34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 FOXD4L4Q8WXT5 416 aaPredicted RBP34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 SYNRGQ9UMZ2 1314 aa34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 NBR1Q14596 966 aa34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 TLK2Q86UE8 772 aa34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 MBOAT7Q96N66 472 aa34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 AGO4Q9HCK5 861 aaKnown RBP34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 DDX25Q9UHL0 483 aaKnown RBP34.73■■■■□ 3.15
CSNK1E-206ENST00000413574 SGPL1O95470 568 aa34.72■■■■□ 3.15
CSNK1E-206ENST00000413574 KCNA2P16389 499 aa34.72■■■■□ 3.15
CSNK1E-206ENST00000413574 TOB1P50616 345 aaPredicted RBP34.72■■■■□ 3.15
CSNK1E-206ENST00000413574 MOXD1Q6UVY6 613 aa34.72■■■■□ 3.15
CSNK1E-206ENST00000413574 CDHR1Q96JP9 859 aa34.72■■■■□ 3.15
CSNK1E-206ENST00000413574 GGPS1O95749 300 aa34.71■■■■□ 3.15
CSNK1E-206ENST00000413574 MYCNP04198 464 aaPredicted RBP34.71■■■■□ 3.15
CSNK1E-206ENST00000413574 RESTQ13127 1097 aa34.71■■■■□ 3.15
CSNK1E-206ENST00000413574 Q4G0T1 1027 aa34.71■■■■□ 3.15
CSNK1E-206ENST00000413574 PPP4R3AQ6IN85 833 aa34.71■■■■□ 3.15
CSNK1E-206ENST00000413574 GJA10Q969M2 543 aa34.71■■■■□ 3.15
CSNK1E-206ENST00000413574 MYADML2A6NDP7 307 aa34.7■■■■□ 3.15
CSNK1E-206ENST00000413574 MAFGO15525 162 aa34.7■■■■□ 3.15
CSNK1E-206ENST00000413574 SETQ01105 290 aaPredicted RBP34.7■■■■□ 3.15
CSNK1E-206ENST00000413574 ARHGAP1Q07960 439 aa34.7■■■■□ 3.15
CSNK1E-206ENST00000413574 OR6J1Q8NGC5 347 aa34.7■■■■□ 3.15
CSNK1E-206ENST00000413574 NKRFO15226 690 aaKnown RBP eCLIP34.7■■■■□ 3.147e-9■■■□□ 16.7
CSNK1E-206ENST00000413574 GJA8P48165 433 aa34.7■■■■□ 3.14
CSNK1E-206ENST00000413574 ITGB3BPQ13352 177 aaPredicted RBP34.7■■■■□ 3.14
CSNK1E-206ENST00000413574 CYFIP1Q7L576 1253 aa34.7■■■■□ 3.14
CSNK1E-206ENST00000413574 CRISPLD2Q9H0B8 497 aa34.7■■■■□ 3.14
CSNK1E-206ENST00000413574 NOL7Q9UMY1 257 aaKnown RBP34.7■■■■□ 3.14
CSNK1E-206ENST00000413574 TELO2Q9Y4R8 837 aa34.7■■■■□ 3.14
CSNK1E-206ENST00000413574 DNAH12Q6ZR08 3092 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 CCDC85CA6NKD9 419 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 MSH4O15457 936 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 ADAMTS4O75173 837 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 GH1P01241 217 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 TFRCP02786 760 aaKnown RBP34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 C6orf222P0C671 652 aaPredicted RBP34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 CELF3Q5SZQ8 465 aaKnown RBP34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 POTEDQ86YR6 584 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 DHX37Q8IY37 1157 aaKnown RBP34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 SENP7Q9BQF6 1050 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 ZNF577Q9BSK1 485 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 AP5M1Q9H0R1 490 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 DAXXQ9UER7 740 aaPredicted RBP34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 OGDHLQ9ULD0 1010 aa34.69■■■■□ 3.14
CSNK1E-206ENST00000413574 CTAGE5O15320 804 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 GCFC2P16383 781 aaKnown RBP34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 MCM7P33993 719 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 GJA9P57773 515 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 BEX3Q00994 111 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 ZNF174Q15697 407 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 TTC38Q5R3I4 469 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 MYSM1Q5VVJ2 828 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 FAM173BQ6P4H8 233 aa34.68■■■■□ 3.14
CSNK1E-206ENST00000413574 BRAPQ7Z569 592 aa34.67■■■■□ 3.14
CSNK1E-206ENST00000413574 NAP1L4Q99733 375 aaKnown RBP34.67■■■■□ 3.14
CSNK1E-206ENST00000413574 UPF3AQ9H1J1 476 aaKnown RBP34.67■■■■□ 3.14
CSNK1E-206ENST00000413574 MLXIPQ9HAP2 919 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms