RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 NUP43Q8NFH3 380 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 WDR66Q8TBY9 1149 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 TTC1Q99614 292 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 EPB41L1Q9H4G0 881 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 IFT22Q9H7X7 185 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 CABP5Q9NP86 173 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 CRTAC1Q9NQ79 661 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 MBNL3Q9NUK0 354 aaKnown RBP7.02□□□□□ -1.29
LSM5-206ENST00000409987 KLHL42Q9P2K6 505 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 PHLDB1Q86UU1 1377 aa7.02□□□□□ -1.29
LSM5-206ENST00000409987 ARID4BQ4LE39 1312 aaPredicted RBP7.01□□□□□ -1.29
LSM5-206ENST00000409987 A0A1W2PQ27 194 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 A0A1W2PQ64 194 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 A0A1W2PQC6 194 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 A0A1W2PQD8 194 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 TCRBV5S4A2TA0A5A2 114 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 FITM1A5D6W6 292 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 ALG1L2C9J202 215 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 NKRFO15226 690 aaKnown RBP eCLIP7.01□□□□□ -1.29
LSM5-206ENST00000409987 GPR39O43194 453 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 MARCH6O60337 910 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 PSPNO60542 156 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 HPXP02790 462 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 AMY2AP04746 511 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 GNAT1P11488 350 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 ATP2A2P16615 1042 aaKnown RBP7.01□□□□□ -1.29
LSM5-206ENST00000409987 YBX3P16989 372 aaKnown RBP eCLIP7.01□□□□□ -1.296e-9■□□□□ 9
LSM5-206ENST00000409987 PRKCAP17252 672 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 AMY2BP19961 511 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 TRHRP34981 398 aaPredicted RBP7.01□□□□□ -1.29
LSM5-206ENST00000409987 JAM2P57087 298 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 NR0B2Q15466 257 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 CRY1Q16526 586 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 CREB3L3Q68CJ9 461 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 NOL8Q76FK4 1167 aaKnown RBP7.01□□□□□ -1.29
LSM5-206ENST00000409987 OTOP3Q7RTS5 596 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 OSTM1Q86WC4 334 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 RIOX2Q8IUF8 465 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 PIP4K2CQ8TBX8 421 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 PANK1Q8TE04 598 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 CCDC120Q96HB5 630 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 PDLIM7Q9NR12 457 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 COA3Q9Y2R0 106 aaPredicted RBP7.01□□□□□ -1.29
LSM5-206ENST00000409987 WASHC2CQ9Y4E1 1318 aa7.01□□□□□ -1.29
LSM5-206ENST00000409987 PTPDC1A2A3K4 754 aa7□□□□□ -1.29
LSM5-206ENST00000409987 ZEB2O60315 1214 aa7□□□□□ -1.29
LSM5-206ENST00000409987 GAS7O60861 476 aa7□□□□□ -1.29
LSM5-206ENST00000409987 FKBP9O95302 570 aa7□□□□□ -1.29
LSM5-206ENST00000409987 GDNFP39905 211 aa7□□□□□ -1.29
LSM5-206ENST00000409987 GUCY2FP51841 1108 aa7□□□□□ -1.29
LSM5-206ENST00000409987 IL2P60568 153 aa7□□□□□ -1.29
LSM5-206ENST00000409987 RBM10P98175 930 aaKnown RBP7□□□□□ -1.29
LSM5-206ENST00000409987 PLCL1Q15111 1095 aa7□□□□□ -1.29
LSM5-206ENST00000409987 GPR19Q15760 415 aa7□□□□□ -1.29
LSM5-206ENST00000409987 MROH9Q5TGP6 573 aa7□□□□□ -1.29
LSM5-206ENST00000409987 FSTL4Q6MZW2 842 aa7□□□□□ -1.29
LSM5-206ENST00000409987 FKBP9P1Q75LS8 142 aa7□□□□□ -1.29
LSM5-206ENST00000409987 OTOP1Q7RTM1 612 aa7□□□□□ -1.29
LSM5-206ENST00000409987 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
LSM5-206ENST00000409987 SH3RF2Q8TEC5 729 aa7□□□□□ -1.29
LSM5-206ENST00000409987 USP33Q8TEY7 942 aa7□□□□□ -1.29
LSM5-206ENST00000409987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7□□□□□ -1.29
LSM5-206ENST00000409987 CHTF18Q8WVB6 975 aa7□□□□□ -1.29
LSM5-206ENST00000409987 GPR101Q96P66 508 aaPredicted RBP7□□□□□ -1.29
LSM5-206ENST00000409987 C19orf44Q9H6X5 657 aa7□□□□□ -1.29
LSM5-206ENST00000409987 THG1LQ9NWX6 298 aaKnown RBP7□□□□□ -1.29
LSM5-206ENST00000409987 ZKSCAN5Q9Y2L8 839 aa7□□□□□ -1.29
LSM5-206ENST00000409987 KCNK3O14649 394 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 DGKIO75912 1065 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 NTRK1P04629 796 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 RNASE1P07998 156 aaKnown RBP6.99□□□□□ -1.29
LSM5-206ENST00000409987 KRT15P19012 456 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 TMPRSS15P98073 1019 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 SPIRE1Q08AE8 756 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 SART3Q15020 963 aaKnown RBP6.99□□□□□ -1.29
LSM5-206ENST00000409987 RNF219Q5W0B1 726 aaPredicted RBP6.99□□□□□ -1.29
LSM5-206ENST00000409987 ARHGAP36Q6ZRI8 547 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 NLRX1Q86UT6 975 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 SPATS2Q86XZ4 545 aaKnown RBP6.99□□□□□ -1.29
LSM5-206ENST00000409987 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
LSM5-206ENST00000409987 TP53INP2Q8IXH6 220 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 SHISA4Q96DD7 197 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 METTL14Q9HCE5 456 aaKnown RBP6.99□□□□□ -1.29
LSM5-206ENST00000409987 CTNND2Q9UQB3 1225 aa6.99□□□□□ -1.29
LSM5-206ENST00000409987 APOBEC2Q9Y235 224 aaKnown RBP6.99□□□□□ -1.29
LSM5-206ENST00000409987 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 MAN2B1O00754 1011 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 KATNA1O75449 491 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 WNT11O96014 354 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 GLI4P10075 376 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 LSSP48449 732 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 GALK1P51570 392 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 CYP4F8P98187 520 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 EXOSC10Q01780 885 aaKnown RBP6.98□□□□□ -1.29
LSM5-206ENST00000409987 ARHGAP44Q17R89 818 aa6.98□□□□□ -1.29
LSM5-206ENST00000409987 HHIPL2Q6UWX4 724 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms