RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TSKSQ9UJT2 592 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 PLEKHG1Q9ULL1 1385 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 TECPR2O15040 1411 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 SART1O43290 800 aaKnown RBP14.03□□□□□ -0.16
HERC3-203ENST00000407637 PCK1P35558 622 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 SLC1A4P43007 532 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 LACTBP83111 547 aaPredicted RBP14.03□□□□□ -0.16
HERC3-203ENST00000407637 ATL2Q8NHH9 583 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
HERC3-203ENST00000407637 APPBP2Q92624 585 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 INPP4AQ96PE3 977 aaPredicted RBP14.03□□□□□ -0.16
HERC3-203ENST00000407637 METTL22Q9BUU2 404 aaPredicted RBP14.03□□□□□ -0.16
HERC3-203ENST00000407637 ANKIB1Q9P2G1 1089 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 TRIM33Q9UPN9 1127 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 EPHB6O15197 1021 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 NKRFO15226 690 aaKnown RBP eCLIP14.02□□□□□ -0.16
HERC3-203ENST00000407637 PALMO75781 387 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 VIMP08670 466 aaKnown RBP14.02□□□□□ -0.16
HERC3-203ENST00000407637 CNGA1P29973 690 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 POLE2P56282 527 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 MRPS35P82673 323 aaKnown RBP14.02□□□□□ -0.16
HERC3-203ENST00000407637 ATP11AP98196 1134 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 GFPT1Q06210 699 aaPredicted RBP14.02□□□□□ -0.16
HERC3-203ENST00000407637 SLC39A6Q13433 755 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 CUL1Q13616 776 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 ZNF174Q15697 407 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 FERMT2Q96AC1 680 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 CENPTQ96BT3 561 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 TMEM87BQ96K49 555 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 RPS6KC1Q96S38 1066 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 RMND1Q9NWS8 449 aa14.02□□□□□ -0.16
HERC3-203ENST00000407637 ZMYND8Q9ULU4 1186 aaPredicted RBP14.02□□□□□ -0.16
HERC3-203ENST00000407637 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 A0A0G2JS52 829 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 GOLGA6L10A0A0M3HER8 536 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 GRID2IPA4D2P6 1211 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 IMPDH2P12268 514 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 NLRP6P59044 892 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 MTMR3Q13615 1198 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 CCDC38Q502W7 563 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 SGMS1Q86VZ5 419 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 LMNTD2Q8IXW0 634 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 TLCD1Q96CP7 247 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 NKX1-2Q9UD57 310 aaPredicted RBP14.02□□□□□ -0.17
HERC3-203ENST00000407637 PLAGL2Q9UPG8 496 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 CHD4Q14839 1912 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.17
HERC3-203ENST00000407637 ZSCAN9O15535 394 aaPredicted RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 LCA5LO95447 670 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 SCNN1BP51168 640 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 CCDC57Q2TAC2 916 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 RNF220Q5VTB9 566 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 TMEM154Q6P9G4 183 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 HOMEZQ8IX15 550 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 USP38Q8NB14 1042 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 SHISA4Q96DD7 197 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 UBE2OQ9C0C9 1292 aaKnown RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 IQSEC3Q9UPP2 1182 aaPredicted RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 A0A1W2PQJ5 194 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 F8VZ95 297 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 PJA2O43164 708 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 PTCD1O75127 700 aaKnown RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 ECEL1O95672 775 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 MTIF2P46199 727 aaKnown RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 COPS6Q7L5N1 327 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.01□□□□□ -0.17
HERC3-203ENST00000407637 CNOT6LQ96LI5 555 aaKnown RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 PRMT1Q99873 361 aaKnown RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 MOV10L1Q9BXT6 1211 aaKnown RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 FAM207AQ9NSI2 230 aaPredicted RBP14.01□□□□□ -0.17
HERC3-203ENST00000407637 PNMA3Q9UL41 463 aa14.01□□□□□ -0.17
HERC3-203ENST00000407637 DEXIO95424 95 aa14□□□□□ -0.17
HERC3-203ENST00000407637 ZFYP08048 801 aaPredicted RBP14□□□□□ -0.17
HERC3-203ENST00000407637 SP100P23497 879 aaPredicted RBP14□□□□□ -0.17
HERC3-203ENST00000407637 RFC5P40937 340 aa14□□□□□ -0.17
HERC3-203ENST00000407637 IFNAR2P48551 515 aa14□□□□□ -0.17
HERC3-203ENST00000407637 EHHADHQ08426 723 aa14□□□□□ -0.17
HERC3-203ENST00000407637 SCARF1Q14162 830 aa14□□□□□ -0.17
HERC3-203ENST00000407637 RTN1Q16799 776 aa14□□□□□ -0.17
HERC3-203ENST00000407637 TMC3Q7Z5M5 1100 aa14□□□□□ -0.17
HERC3-203ENST00000407637 CSGALNACT2Q8N6G5 542 aa14□□□□□ -0.17
HERC3-203ENST00000407637 NOC4LQ9BVI4 516 aaKnown RBP14□□□□□ -0.17
HERC3-203ENST00000407637 A0A087WZG4 1122 aa14□□□□□ -0.17
HERC3-203ENST00000407637 MAGEA8P43361 318 aa14□□□□□ -0.17
HERC3-203ENST00000407637 ZNF131P52739 623 aa14□□□□□ -0.17
HERC3-203ENST00000407637 COPS2P61201 443 aa14□□□□□ -0.17
HERC3-203ENST00000407637 MIIPQ5JXC2 388 aa14□□□□□ -0.17
HERC3-203ENST00000407637 TTI2Q6NXR4 508 aa14□□□□□ -0.17
HERC3-203ENST00000407637 PI16Q6UXB8 463 aa14□□□□□ -0.17
HERC3-203ENST00000407637 SLC17A8Q8NDX2 589 aa14□□□□□ -0.17
HERC3-203ENST00000407637 PLEKHG4BQ96PX9 1271 aa14□□□□□ -0.17
HERC3-203ENST00000407637 RAB17Q9H0T7 212 aa14□□□□□ -0.17
HERC3-203ENST00000407637 ARHGEF3Q9NR81 526 aa14□□□□□ -0.17
HERC3-203ENST00000407637 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
HERC3-203ENST00000407637 DISP2A7MBM2 1401 aa14□□□□□ -0.17
HERC3-203ENST00000407637 C5P01031 1676 aa14□□□□□ -0.17
HERC3-203ENST00000407637 RGPD2P0DJD1 1756 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms