RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 PCCAP05165 728 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 IGKV5-2P06315 115 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 PF4V1P10720 104 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 YY1P25490 414 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 ALDH1B1P30837 517 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 DDIT3P35638 169 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 GJA9P57773 515 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 ZBED6P86452 979 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 TRIP4Q15650 581 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 ELF2Q15723 593 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 CDC37Q16543 378 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 ABCB5Q2M3G0 1257 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 SLC10A6Q3KNW5 377 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 DACT2Q5SW24 774 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 EPM2AIP1Q7L775 607 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 SRLQ86TD4 932 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 PPM1KQ8N3J5 372 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 PI4KAP1Q8N8J0 262 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 POF1BQ8WVV4 589 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 RSPH1Q8WYR4 309 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 CLIP3Q96DZ5 547 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 DHRS4Q9BTZ2 278 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 RETREG1Q9H6L5 497 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 INTS7Q9NVH2 962 aaKnown RBP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 CWC25Q9NXE8 425 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 PPP4R2Q9NY27 417 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 TRMT112Q9UI30 125 aaKnown RBP6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 MAP3K2Q9Y2U5 619 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 LTBP1Q14766 1721 aa6.3□□□□□ -1.4
HMGB3P7-201ENST00000400214 SPEF2Q9C093 1822 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 CDHR2Q9BYE9 1310 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 TTC24A2A3L6 582 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 FAM177BA6PVY3 158 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 BRINP1O60477 761 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 DNAJC8O75937 253 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 RPN1P04843 607 aaKnown RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 NUCB1Q02818 461 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 DHCR24Q15392 516 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 SF3B3Q15393 1217 aaKnown RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 SEPT7Q16181 437 aaKnown RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 CWF19L2Q2TBE0 894 aaKnown RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 TUBB8Q3ZCM7 444 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 CCDC92Q53HC0 331 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 FAM209AQ5JX71 171 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 SPECC1Q5M775 1068 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 GPR158Q5T848 1215 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 KIAA0319Q5VV43 1072 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 TTBK2Q6IQ55 1244 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 AGMOQ6ZNB7 445 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 LRRC69Q6ZNQ3 347 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 NLRP8Q86W28 1048 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 LRRC47Q8N1G4 583 aaKnown RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 SYNE4Q8N205 404 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 KIAA1958Q8N8K9 716 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 LINS1Q8NG48 757 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 DNAAF4Q8WXU2 420 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 ZNF622Q969S3 477 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 TNIP3Q96KP6 325 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 NLRP3Q96P20 1036 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 SPSB2Q99619 263 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 MYD88Q99836 296 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 EHD4Q9H223 541 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 ELP3Q9H9T3 547 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 FNIP2Q9P278 1114 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 NXF1Q9UBU9 619 aaKnown RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 FCF1Q9Y324 198 aaKnown RBP6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 A0A1B0GUL6 1792 aa6.29□□□□□ -1.4
HMGB3P7-201ENST00000400214 PTPRCP08575 1304 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 ZBED9Q6R2W3 1325 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 PSME4Q14997 1843 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 A0A1W2PP55 124 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 NEURL1BA8MQ27 555 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 H7C1W4 665 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 NFKBIEO00221 500 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 GNRH1P01148 92 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 SETSIPP0DME0 302 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 ID4P47928 161 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 NEXNQ0ZGT2 675 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 TLR1Q15399 786 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 ATP13A4Q4VNC1 1196 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 CASC1Q6TDU7 716 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 ARHGAP27Q6ZUM4 889 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 RSRC2Q7L4I2 434 aaKnown RBP6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 TTC6Q86TZ1 520 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 TRIM42Q8IWZ5 723 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 NPAS3Q8IXF0 933 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 FAM186BQ8IYM0 893 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 AHI1Q8N157 1196 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 C1orf127Q8N9H9 656 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 C19orf47Q8N9M1 422 aaKnown RBP6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 SSH1Q8WYL5 1049 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 FAM89AQ96GI7 184 aa6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 RBM17Q96I25 401 aaKnown RBP6.28□□□□□ -1.4
HMGB3P7-201ENST00000400214 LRGUKQ96M69 825 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms