RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ALX1Q15699 326 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 NPY5RQ15761 445 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 TICAM2Q86XR7 235 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC13Q8IYE1 715 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CNPY4Q8N129 248 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 DEPDC4Q8N2C3 294 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 MMGT1Q8N4V1 131 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 TBC1D31Q96DN5 1066 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CEP83Q9Y592 693 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 PDS5AQ29RF7 1337 aaKnown RBP10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 WDR17Q8IZU2 1322 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 GOLGA6L10A6NI86 522 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 LRRC41Q15345 812 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 NAALADL2Q58DX5 795 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 TTI2Q6NXR4 508 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 EMBQ6PCB8 327 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 NLRP10Q86W26 655 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 IFT20Q8IY31 132 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 ZKSCAN4Q969J2 545 aaPredicted RBP10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 MAP10Q9P2G4 905 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 PLAAQ9Y263 795 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 FAM205AQ6ZU69 1335 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 A0A1W2PQC6 194 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 SCG2P13521 617 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 SEC23AQ15436 765 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 MICALCLQ6ZW33 695 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 HEATR3Q7Z4Q2 680 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC170Q8IYT3 715 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 MYCBPAPQ8TBZ2 947 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 FBXO41Q8TF61 875 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 P2RX5Q93086 422 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 TRIM31Q9BZY9 425 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 EPN3Q9H201 632 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 HAUS2Q9NVX0 235 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 ODF2LQ9ULJ1 636 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 C5P01031 1676 aa10.91□□□□□ -0.66
PTCHD4-202ENST00000398738 PPP1R12BO60237 982 aaPredicted RBP10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 TCP1P17987 556 aaKnown RBP10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 GYG1P46976 350 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 FNTAP49354 379 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 GSCP56915 257 aaPredicted RBP10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 MEA1Q16626 185 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 SPRED3Q2MJR0 410 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 CFAP221Q4G0U5 840 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 ALS2CLQ60I27 953 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 LRRC15Q8TF66 581 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 TLR10Q9BXR5 811 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 ROBO1Q9Y6N7 1651 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 TMEM94Q12767 1356 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 ABCC12Q96J65 1359 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 LMO7Q8WWI1 1683 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 SMIM23A6NLE4 172 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 PALMO75781 387 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 PLCG1P19174 1290 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 TROAPQ12815 778 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 PTGISQ16647 500 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 VGLL2Q8N8G2 317 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 UBLCP1Q8WVY7 318 aaPredicted RBP10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 THAP9Q9H5L6 903 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 SLC40A1Q9NP59 571 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 AFDNP55196 1824 aaKnown RBP10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.66
PTCHD4-202ENST00000398738 OPLAHO14841 1288 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 SKAP2O75563 359 aaPredicted RBP10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 CYP2D6P10635 497 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 TMTC3Q6ZXV5 915 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 CASKIN2Q8WXE0 1202 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 NUP58Q9BVL2 599 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 AP1M1Q9BXS5 423 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 TSGA10Q9BZW7 698 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 VAT1LQ9HCJ6 419 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 RTL9Q8NET4 1388 aa10.9□□□□□ -0.67
PTCHD4-202ENST00000398738 AHDC1Q5TGY3 1603 aaPredicted RBP10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 TSPY2A6NKD2 308 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 CHUKO15111 745 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 ARID4AP29374 1257 aaPredicted RBP10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 MDH1P40925 334 aaKnown RBP10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 TECP42680 631 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 NOX5Q96PH1 765 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 TMOD3Q9NYL9 352 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 HGSO14964 777 aaPredicted RBP10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 GOLGA8HP0CJ92 632 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 PAK2Q13177 524 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 PPP2R5AQ15172 486 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 BLIDQ8IZY5 108 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 CCDC47Q96A33 483 aaKnown RBP10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 TTYH3Q9C0H2 523 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 TBC1D7Q9P0N9 293 aa10.89□□□□□ -0.67
PTCHD4-202ENST00000398738 PALM3A6NDB9 673 aaPredicted RBP10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 PHF20L1A8MW92 1017 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 KLRC4O43908 158 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 NEBLO76041 1014 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 MIIPQ5JXC2 388 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 TNFRSF25Q93038 417 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 NDST4Q9H3R1 872 aa10.88□□□□□ -0.67
PTCHD4-202ENST00000398738 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms