RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 JAKMIP3Q5VZ66 844 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 XRRA1Q6P2D8 792 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 PDXDC1Q6P996 788 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 REC114Q7Z4M0 266 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 EPB41L4BQ9H329 900 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 ZBTB21Q9ULJ3 1066 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 ST14Q9Y5Y6 855 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 DGKBQ9Y6T7 804 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 FAM221AA4D161 298 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 ZSCAN22P10073 491 aaPredicted RBP6.03□□□□□ -1.44
GABPB1-204ENST00000396464 ETV3P41162 512 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 PCBP1Q15365 356 aaKnown RBP eCLIP6.03□□□□□ -1.44
GABPB1-204ENST00000396464 ABCB5Q2M3G0 1257 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 KRT77Q7Z794 578 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 CDH24Q86UP0 819 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 SECISBP2LQ93073 1101 aaKnown RBP6.03□□□□□ -1.44
GABPB1-204ENST00000396464 SYTL4Q96C24 671 aaPredicted RBP6.03□□□□□ -1.44
GABPB1-204ENST00000396464 KLHL11Q9NVR0 708 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 DDX20Q9UHI6 824 aaKnown RBP6.03□□□□□ -1.44
GABPB1-204ENST00000396464 SLC45A1Q9Y2W3 748 aa6.03□□□□□ -1.44
GABPB1-204ENST00000396464 SETD1BQ9UPS6 1966 aaKnown RBP6.02□□□□□ -1.45
GABPB1-204ENST00000396464 FIBPO43427 364 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 SUSD5O60279 629 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 DNAJC8O75937 253 aaPredicted RBP6.02□□□□□ -1.45
GABPB1-204ENST00000396464 AGR2O95994 175 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 C1QTNF9P0C862 333 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 ECE1P42892 770 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 HK2P52789 917 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 GJA9P57773 515 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 RPS26P62854 115 aaKnown RBP6.02□□□□□ -1.45
GABPB1-204ENST00000396464 SEPT7Q16181 437 aaKnown RBP6.02□□□□□ -1.45
GABPB1-204ENST00000396464 PTPN21Q16825 1174 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 FAM209AQ5JX71 171 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 PPP4R3AQ6IN85 833 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 TMPRSS7Q7RTY8 843 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 SKAP1Q86WV1 359 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 MYLIPQ8WY64 445 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 GAL3ST3Q96A11 431 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 DHRS4Q9BTZ2 278 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 NLRC4Q9NPP4 1024 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 ANLNQ9NQW6 1124 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 DMTF1Q9Y222 760 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 PCDHB5Q9Y5E4 795 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 FRMPD2Q68DX3 1309 aaPredicted RBP6.02□□□□□ -1.45
GABPB1-204ENST00000396464 CNTNAP4Q9C0A0 1308 aa6.02□□□□□ -1.45
GABPB1-204ENST00000396464 ABHD14A-ACY1A0A1B0GW23 586 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 IQCA1LA6NCM1 817 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 TCAF2A6NFQ2 919 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 PF4V1P10720 104 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 TNFAIP3P21580 790 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 DDIT3P35638 169 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 PDE4BQ07343 736 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 VHLLQ6RSH7 139 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 EPM2AIP1Q7L775 607 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 MAATS1Q7Z4T9 603 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 CCDC84Q86UT8 332 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 CREG2Q8IUH2 290 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 SIAH1Q8IUQ4 282 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 AHI1Q8N157 1196 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 NKAPQ8N5F7 415 aaKnown RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 PIWIL2Q8TC59 973 aaKnown RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 JARID2Q92833 1246 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 TTC17Q96AE7 1141 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 CLIP3Q96DZ5 547 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 SERINC2Q96SA4 455 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 MRPL4Q9BYD3 311 aaKnown RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 CSRNP2Q9H175 543 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 ALDH8A1Q9H2A2 487 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 TRIT1Q9H3H1 467 aaKnown RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 DDX21Q9NR30 783 aaKnown RBP eCLIP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 C19orf73Q9NVV2 129 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 PNMA8BQ9ULN7 279 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-204ENST00000396464 PCDHGB3Q9Y5G1 929 aa6.01□□□□□ -1.45
GABPB1-204ENST00000396464 BICDL2A1A5D9 508 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 NPIPB6E9PJ23 425 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 F5H423 210 aaPredicted RBP6□□□□□ -1.45
GABPB1-204ENST00000396464 DHX16O60231 1041 aaKnown RBP6□□□□□ -1.45
GABPB1-204ENST00000396464 CILPO75339 1184 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 NPTXRO95502 500 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 POU3F2P20265 443 aaPredicted RBP6□□□□□ -1.45
GABPB1-204ENST00000396464 GTF2A2P52657 109 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 TNK2Q07912 1038 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 DDX10Q13206 875 aaKnown RBP6□□□□□ -1.45
GABPB1-204ENST00000396464 GPR158Q5T848 1215 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 CIAPIN1Q6FI81 312 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 CYB5RLQ6IPT4 315 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 MZT2AQ6P582 158 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 C16orf54Q6UWD8 224 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 SRLQ86TD4 932 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 RASSF3Q86WH2 238 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 TTC1Q99614 292 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 DPH2Q9BQC3 489 aaPredicted RBP6□□□□□ -1.45
GABPB1-204ENST00000396464 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 MIR1-1HGQ9H1L0 117 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 EPN3Q9H201 632 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 TCF7L1Q9HCS4 588 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 SUCOQ9UBS9 1254 aaKnown RBP6□□□□□ -1.45
GABPB1-204ENST00000396464 PGAP2Q9UHJ9 254 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms