RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 FAM86B1E9PN63 330 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 NKRFO15226 690 aaKnown RBP eCLIP10.07□□□□□ -0.8
TDP1-202ENST00000393452 PLA2G6O60733 806 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 FAM86B2P0C5J1 330 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 MTIF2P46199 727 aaKnown RBP10.07□□□□□ -0.8
TDP1-202ENST00000393452 ZCWPW2Q504Y3 356 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 PRR16Q569H4 304 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 HAUS3Q68CZ6 603 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 WDR59Q6PJI9 974 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 SPICE1Q8N0Z3 855 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 IQCDQ96DY2 449 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 NOC4LQ9BVI4 516 aaKnown RBP10.07□□□□□ -0.8
TDP1-202ENST00000393452 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
TDP1-202ENST00000393452 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 PGAP2Q9UHJ9 254 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 ZNRF3Q9ULT6 936 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
TDP1-202ENST00000393452 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 A0A0U1RQJ8 604 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 A0A1W2PQJ5 194 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 POTEB3A0JP26 581 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 FRMD3A2A2Y4 597 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 POTECB2RU33 542 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 E9PMD0 336 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 MED24O75448 989 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
TDP1-202ENST00000393452 PLA2G4BP0C869 781 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 SLC12A3P55017 1021 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 POTEBQ6S5H4 581 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 GLIS3Q8NEA6 775 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 ATRIPQ8WXE1 791 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 CHP1Q99653 195 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 LZTFL1Q9NQ48 299 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 BMP2KQ9NSY1 1161 aaPredicted RBP10.07□□□□□ -0.8
TDP1-202ENST00000393452 PANK4Q9NVE7 773 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.07□□□□□ -0.8
TDP1-202ENST00000393452 MRFAP1Q9Y605 127 aa10.07□□□□□ -0.8
TDP1-202ENST00000393452 V9GYY5 206 aaPredicted RBP10.07□□□□□ -0.8
TDP1-202ENST00000393452 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 TADA3O75528 432 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 NDUFA10O95299 355 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 SPATA31C1P0DKV0 1188 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 CYP11B2P19099 503 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 RPA1P27694 616 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 STAT3P40763 770 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 ARHGAP25P42331 645 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 ERCC6LQ2NKX8 1250 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 FAM26FQ5R3K3 315 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 CATSPER3Q86XQ3 398 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 MYOCDQ8IZQ8 938 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 ACRBPQ8NEB7 543 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 ZNF397Q8NF99 534 aaPredicted RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 AGPAT5Q9NUQ2 364 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 MYO1AQ9UBC5 1043 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 STK24Q9Y6E0 443 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 EPN1Q9Y6I3 576 aaPredicted RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 IGLV3-22A0A075B6J6 115 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 EFCAB8A8MWE9 144 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 MSH4O15457 936 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 KIF5CO60282 957 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 TAL1P17542 331 aaPredicted RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 TRIM21P19474 475 aaKnown RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 ZBED6P86452 979 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 CDK17Q00537 523 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 MAN2A1Q16706 1144 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 VWA3BQ502W6 1294 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 FKBP15Q5T1M5 1219 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 CCDC65Q8IXS2 484 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 TMEM39BQ9GZU3 492 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 RANBP17Q9H2T7 1088 aaKnown RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 VCPKMTQ9H867 229 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 SIK3Q9Y2K2 1263 aa10.06□□□□□ -0.8
TDP1-202ENST00000393452 REXO2Q9Y3B8 237 aaKnown RBP10.06□□□□□ -0.8
TDP1-202ENST00000393452 FER1L6Q2WGJ9 1857 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 CAP2P40123 477 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 BAG6P46379 1132 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 KLK7P49862 253 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 CXCL9Q07325 125 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 LRRC41Q15345 812 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 ARHGAP29Q52LW3 1261 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 ARSHQ5FYA8 562 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 ZNF662Q6ZS27 426 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 GPBP1Q86WP2 473 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 NIM1KQ8IY84 436 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 CHURC1Q8WUH1 139 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 UIMC1Q96RL1 719 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 TSG101Q99816 390 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 NDST4Q9H3R1 872 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 VAV3Q9UKW4 847 aa10.05□□□□□ -0.8
TDP1-202ENST00000393452 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 ABL1P00519 1130 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms