RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RNF169Q8NCN4 708 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 MRPL47Q9HD33 250 aaKnown RBP15.89■□□□□ 0.13
CCDC50-201ENST00000392455 MORF4L2Q15014 288 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 ARHGEF16Q5VV41 709 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 NIM1KQ8IY84 436 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 SNX19Q92543 992 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 MAGEB5Q9BZ81 275 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 MKL2Q9ULH7 1088 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 SNTNA6NMZ2 147 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 TAF1BQ53T94 588 aaPredicted RBP15.89■□□□□ 0.13
CCDC50-201ENST00000392455 RETREG2Q8NC44 543 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 WBP4O75554 376 aaKnown RBP15.89■□□□□ 0.13
CCDC50-201ENST00000392455 TRPA1O75762 1119 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 U2AF2P26368 475 aaKnown RBP eCLIP15.89■□□□□ 0.131e-5■□□□□ 9.3
CCDC50-201ENST00000392455 EPHB4P54760 987 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 TRIM71Q2Q1W2 868 aaKnown RBP15.89■□□□□ 0.13
CCDC50-201ENST00000392455 KLC2Q9H0B6 622 aa15.89■□□□□ 0.13
CCDC50-201ENST00000392455 IGSF3O75054 1194 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 AP2B1P63010 937 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 MDM2Q00987 491 aaPredicted RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 KIF22Q14807 665 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 FAM102BQ5T8I3 360 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 PCGF5Q86SE9 256 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 RDH13Q8NBN7 331 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 NOP53Q9NZM5 478 aaKnown RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 ATP11BQ9Y2G3 1177 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 PRG3Q9Y2Y8 225 aaPredicted RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 EIF2S1P05198 315 aaKnown RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 PTK2Q05397 1052 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 TNFAIP1Q13829 316 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 BLOC1S6Q9UL45 172 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 H7C1D1 291 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 KRT75O95678 551 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 YWHAGP61981 247 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 EIF2B5Q13144 721 aaKnown RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 ARL13BQ3SXY8 428 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 ZNF148Q9UQR1 794 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 C1orf228Q6PIY5 440 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 FRA10AC1Q70Z53 315 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 TCIRG1Q13488 830 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 FAM47AQ5JRC9 791 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 HDDC2Q7Z4H3 204 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 TUBGCP3Q96CW5 907 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 VPS54Q9P1Q0 977 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 STOML1Q9UBI4 398 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 FAM98CQ17RN3 349 aaKnown RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 TYW1BQ6NUM6 668 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 AS3MTQ9HBK9 375 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 ARMCX3Q9UH62 379 aaPredicted RBP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 MAP3K15Q6ZN16 1313 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 H0YC42 278 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 LIG4P49917 911 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 SF3A3Q12874 501 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC50-201ENST00000392455 CNGA2Q16280 664 aa15.88■□□□□ 0.13
CCDC50-201ENST00000392455 A0A087WUV0 522 aaPredicted RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 SGK1O00141 431 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 SEC24BO95487 1268 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 BASP1P80723 227 aaKnown RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 ANO5Q75V66 913 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 SAAL1Q96ER3 474 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 CBX8Q9HC52 389 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 SMYD2Q9NRG4 433 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 DAB2P98082 770 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 ACAD11Q709F0 780 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 RRAGAQ7L523 313 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 PAPOLAP51003 745 aaKnown RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 TSTA3Q13630 321 aaPredicted RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 TFDP1Q14186 410 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 METTL23Q86XA0 190 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 RAB42Q8N4Z0 105 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 WARS2Q9UGM6 360 aaKnown RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 MAP3K19Q56UN5 1328 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 GAS7O60861 476 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 SLC52A2Q9HAB3 445 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 NBPF20Q3BBV1 942 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 HORMAD1Q86X24 394 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 STAMBPL1Q96FJ0 436 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 PBKQ96KB5 322 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 LSM14BQ9BX40 385 aaKnown RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 TMEM60Q9H2L4 133 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 TMEM245Q9H330 911 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 NFU1Q9UMS0 254 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 DTNBO60941 627 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 A1BGP04217 495 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 MTX1Q13505 466 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 CUL1Q13616 776 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 CEP55Q53EZ4 464 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 OTUD7AQ8TE49 926 aaPredicted RBP15.87■□□□□ 0.13
CCDC50-201ENST00000392455 PHLPP2Q6ZVD8 1323 aa15.87■□□□□ 0.13
CCDC50-201ENST00000392455 STAT2P52630 851 aa15.86■□□□□ 0.13
CCDC50-201ENST00000392455 ADCY2Q08462 1091 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms