RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SEPT11Q9NVA2 429 aaKnown RBP14.31□□□□□ -0.12
USP11-204ENST00000377107 ADAMTS1Q9UHI8 967 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 CACNA1SQ13698 1873 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 ANKRD36CQ5JPF3 1778 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 ZNF263O14978 683 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 MYBL2P10244 700 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 ZFPM1Q8IX07 1006 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 DAGLBQ8NCG7 672 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 LRRC1Q9BTT6 524 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 PKD2L1Q9P0L9 805 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 COASYQ13057 564 aa14.3□□□□□ -0.12
USP11-204ENST00000377107 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
USP11-204ENST00000377107 AMPD2Q01433 879 aa14.3□□□□□ -0.12
USP11-204ENST00000377107 TMCO5BA8MYB1 307 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 EIF3CLB5ME19 914 aaKnown RBP14.29□□□□□ -0.12
USP11-204ENST00000377107 MYL1P05976 194 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 EHHADHQ08426 723 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 ADAM9Q13443 819 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 TAF3Q5VWG9 929 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 MAEAQ7L5Y9 396 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 CCDC84Q86UT8 332 aaPredicted RBP14.29□□□□□ -0.12
USP11-204ENST00000377107 MSANTD4Q8NCY6 345 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
USP11-204ENST00000377107 PSMD14O00487 310 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 GGCXP38435 758 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 GUCY2FP51841 1108 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 IQCEQ6IPM2 695 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 FOXR1Q6PIV2 292 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 ANKS1AQ92625 1134 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 CWC15Q9P013 229 aaKnown RBP14.29□□□□□ -0.12
USP11-204ENST00000377107 DMGDHQ9UI17 866 aaKnown RBP14.29□□□□□ -0.12
USP11-204ENST00000377107 BCS1LQ9Y276 419 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 EP400Q96L91 3159 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 PNMA6FA0A0J9YX94 578 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
USP11-204ENST00000377107 CLIC2O15247 247 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 ACTN1P12814 892 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 CCDC170Q8IYT3 715 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 TRIM58Q8NG06 486 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
USP11-204ENST00000377107 TIAM2Q8IVF5 1701 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 PLA2G4BP0C869 781 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 GYS1P13807 737 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 KLHL30Q0D2K2 578 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 KIAA0753Q2KHM9 967 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 SLC9C1Q4G0N8 1177 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 SFMBT2Q5VUG0 894 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 CCDC65Q8IXS2 484 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 FKBP3Q00688 224 aaKnown RBP14.28□□□□□ -0.12
USP11-204ENST00000377107 ZNF543Q08ER8 600 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 HLTFQ14527 1009 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP11-204ENST00000377107 QRICH1Q2TAL8 776 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 SELENOOQ9BVL4 669 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 GOLGA6BA6NDN3 693 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 MAP2K7O14733 419 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 PPP1R11O60927 126 aaPredicted RBP14.28□□□□□ -0.12
USP11-204ENST00000377107 PRPF6O94906 941 aaKnown RBP14.28□□□□□ -0.12
USP11-204ENST00000377107 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
USP11-204ENST00000377107 SLFN13Q68D06 897 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 CENPPQ6IPU0 288 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 C8orf74Q6P047 294 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 RDH13Q8NBN7 331 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 STK17AQ9UEE5 414 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 RAB21Q9UL25 225 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 COL4A3BPQ9Y5P4 624 aa14.28□□□□□ -0.12
USP11-204ENST00000377107 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.12
USP11-204ENST00000377107 VGLL3A8MV65 326 aa14.27□□□□□ -0.12
USP11-204ENST00000377107 TRIM66O15016 1216 aa14.27□□□□□ -0.12
USP11-204ENST00000377107 SEPT2Q15019 361 aa14.27□□□□□ -0.12
USP11-204ENST00000377107 VPS72Q15906 364 aa14.27□□□□□ -0.12
USP11-204ENST00000377107 AFAP1L1Q8TED9 768 aa14.27□□□□□ -0.12
USP11-204ENST00000377107 NOX5Q96PH1 765 aa14.27□□□□□ -0.12
USP11-204ENST00000377107 MAGEF1Q9HAY2 307 aa14.27□□□□□ -0.12
USP11-204ENST00000377107 LRP5O75197 1615 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 BBOX1O75936 387 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 EEF2P13639 858 aaKnown RBP14.27□□□□□ -0.13
USP11-204ENST00000377107 NR2F2P24468 414 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.27□□□□□ -0.13
USP11-204ENST00000377107 CERS5Q8N5B7 392 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 TEKT1Q969V4 418 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 SEPT12Q8IYM1 358 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.13
USP11-204ENST00000377107 PIGOQ8TEQ8 1089 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 EXOC4Q96A65 974 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 OSBPL9Q96SU4 736 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 ABCA3Q99758 1704 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 TSGA10Q9BZW7 698 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 FAM107BQ9H098 131 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 RIOX1Q9H6W3 641 aa14.27□□□□□ -0.13
USP11-204ENST00000377107 JRKLQ9Y4A0 524 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms