RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ATF2P15336 505 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 MYO1EQ12965 1108 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 ZBED2Q9BTP6 218 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 IPO11Q9UI26 975 aaKnown RBP14.84□□□□□ -0.03
GPC6-201ENST00000377047 RC3H1Q5TC82 1133 aaKnown RBP14.83□□□□□ -0.03
GPC6-201ENST00000377047 NOP9Q86U38 636 aaKnown RBP14.83□□□□□ -0.03
GPC6-201ENST00000377047 CCDC13Q8IYE1 715 aa14.83□□□□□ -0.03
GPC6-201ENST00000377047 BBS5Q8N3I7 341 aa14.83□□□□□ -0.03
GPC6-201ENST00000377047 MICAL1Q8TDZ2 1067 aa14.83□□□□□ -0.03
GPC6-201ENST00000377047 DCAF4Q8WV16 495 aa14.83□□□□□ -0.03
GPC6-201ENST00000377047 OGFRQ9NZT2 677 aa14.83□□□□□ -0.03
GPC6-201ENST00000377047 ATP8B3O60423 1300 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 RGS16O15492 202 aaPredicted RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 CDC25AP30304 524 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 RASSF7Q02833 373 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 SLC27A3Q5K4L6 730 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 GRAMD1CQ8IYS0 662 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 RPUSD2Q8IZ73 545 aaKnown RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 GSDMAQ96QA5 445 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 OSBPL3Q9H4L5 887 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 ANAPC5Q9UJX4 755 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 ABCD1P33897 745 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 B4GALNT4Q76KP1 1039 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 PARVGQ9HBI0 331 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 RAVER2Q9HCJ3 691 aaKnown RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 SLC12A6Q9UHW9 1150 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 MYO1FO00160 1098 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 ANXA13P27216 316 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 CTNNA1P35221 906 aaKnown RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 DHTKD1Q96HY7 919 aaPredicted RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 STK17AQ9UEE5 414 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 AXIN2Q9Y2T1 843 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 PLA2G4BP0C869 781 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 KIF23Q02241 960 aaPredicted RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 NAA35Q5VZE5 725 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 PPP4R1Q8TF05 950 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 GJD4Q96KN9 370 aaPredicted RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 RPF1Q9H9Y2 349 aaKnown RBP14.83□□□□□ -0.04
GPC6-201ENST00000377047 PPP2R2CQ9Y2T4 447 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 PCDHA5Q9Y5H7 936 aa14.83□□□□□ -0.04
GPC6-201ENST00000377047 NXNQ6DKJ4 435 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 NCAPD2Q15021 1401 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 FAM196BA6NMK8 535 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 ZNF853P0CG23 659 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 PRDX5P30044 214 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 SCARA5Q6ZMJ2 495 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 FTOQ9C0B1 505 aaKnown RBP eCLIP14.82□□□□□ -0.04
GPC6-201ENST00000377047 CD209Q9NNX6 404 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 A0A1W2PQ27 194 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 A0A1W2PQ64 194 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 A0A1W2PQD8 194 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 CD58P19256 250 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 ANKRD13CQ8N6S4 541 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 ZNF653Q96CK0 615 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 TNS3Q68CZ2 1445 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 SLC4A1P02730 911 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 GSTA1P08263 222 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 GSTA2P09210 222 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 ADRA2BP18089 450 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 WHAMMP3Q1A5X7 153 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 LRRC4Q9HBW1 653 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 HOXC10Q9NYD6 342 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 ARHGEF37A1IGU5 675 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 SGK1O00141 431 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 PLEKHA8P1O95397 391 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 ELF1P32519 619 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
GPC6-201ENST00000377047 DSTYKQ6XUX3 929 aa14.82□□□□□ -0.04
GPC6-201ENST00000377047 TRIM56Q9BRZ2 755 aaKnown RBP14.82□□□□□ -0.04
GPC6-201ENST00000377047 CPSF3Q9UKF6 684 aaKnown RBP14.82□□□□□ -0.04
GPC6-201ENST00000377047 USP17L5A8MUK1 530 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 MED7O43513 233 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 STX2P32856 288 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 SATB1Q01826 763 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 ZNF658Q5TYW1 1059 aaPredicted RBP14.81□□□□□ -0.04
GPC6-201ENST00000377047 POLR3EQ9NVU0 708 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 PTPN22Q9Y2R2 807 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 BZW2Q9Y6E2 419 aaKnown RBP14.81□□□□□ -0.04
GPC6-201ENST00000377047 MAPK4P31152 587 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
GPC6-201ENST00000377047 GCNAQ96QF7 691 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 BRIP1Q9BX63 1249 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
GPC6-201ENST00000377047 APOBEC3FQ8IUX4 373 aaKnown RBP14.81□□□□□ -0.04
GPC6-201ENST00000377047 UBE2TQ9NPD8 197 aaPredicted RBP14.81□□□□□ -0.04
GPC6-201ENST00000377047 GOLGA8CPA6NN73 597 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 SNAP23O00161 211 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 PLCG1P19174 1290 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 CCNYQ8ND76 341 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 RPGRIP1Q96KN7 1286 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 TYW1Q9NV66 732 aaKnown RBP14.81□□□□□ -0.04
GPC6-201ENST00000377047 IFNAR1P17181 557 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 MAP7Q14244 749 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 PPP2R5EQ16537 467 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 TRIM11Q96F44 468 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 MSTO1Q9BUK6 570 aa14.81□□□□□ -0.04
GPC6-201ENST00000377047 ZNF233A6NK53 670 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms