RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 NR5A1Q13285 461 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 LRRC41Q15345 812 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 LY6KQ17RY6 165 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 EARS2Q5JPH6 523 aaKnown RBP22.69■■□□□ 1.22
DDR1-228ENST00000376575 TLK2Q86UE8 772 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 HSCBQ8IWL3 235 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 DIS3L2Q8IYB7 885 aaKnown RBP22.69■■□□□ 1.22
DDR1-228ENST00000376575 ARRDC4Q8NCT1 418 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 CYP2W1Q8TAV3 490 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 TBCKQ8TEA7 893 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 SENP7Q9BQF6 1050 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 MRVI1Q9Y6F6 885 aa22.69■■□□□ 1.22
DDR1-228ENST00000376575 CYP3A7-CYP3A51PA0A087WV96 503 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 DNM1LO00429 736 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 PGK1P00558 417 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 CYP3A7P24462 503 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 ARHGAP1Q07960 439 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 NLRX1Q86UT6 975 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 COPS5Q92905 334 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 CDHR1Q96JP9 859 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 BRMS1Q9HCU9 246 aa22.68■■□□□ 1.22
DDR1-228ENST00000376575 MYADML2A6NDP7 307 aa22.67■■□□□ 1.22
DDR1-228ENST00000376575 COL6A1P12109 1028 aa22.67■■□□□ 1.22
DDR1-228ENST00000376575 RGS19P49795 217 aa22.67■■□□□ 1.22
DDR1-228ENST00000376575 FOSBP53539 338 aa22.67■■□□□ 1.22
DDR1-228ENST00000376575 GUCY1B3Q02153 619 aa22.67■■□□□ 1.22
DDR1-228ENST00000376575 NONOQ15233 471 aaKnown RBP eCLIP22.67■■□□□ 1.22
DDR1-228ENST00000376575 LENG9Q96B70 501 aa22.67■■□□□ 1.22
DDR1-228ENST00000376575 MBOAT7Q96N66 472 aa22.67■■□□□ 1.22
DDR1-228ENST00000376575 FOXP1Q9H334 677 aaPredicted RBP22.67■■□□□ 1.22
DDR1-228ENST00000376575 DYNC1LI2O43237 492 aaPredicted RBP22.66■■□□□ 1.22
DDR1-228ENST00000376575 KCNA2P16389 499 aa22.66■■□□□ 1.22
DDR1-228ENST00000376575 UBA1P22314 1058 aaKnown RBP22.66■■□□□ 1.22
DDR1-228ENST00000376575 IRX5P78411 483 aaPredicted RBP22.66■■□□□ 1.22
DDR1-228ENST00000376575 MTMR1Q13613 665 aa22.66■■□□□ 1.22
DDR1-228ENST00000376575 CELF3Q5SZQ8 465 aaKnown RBP22.66■■□□□ 1.22
DDR1-228ENST00000376575 MYSM1Q5VVJ2 828 aa22.66■■□□□ 1.22
DDR1-228ENST00000376575 MOXD1Q6UVY6 613 aa22.66■■□□□ 1.22
DDR1-228ENST00000376575 RNF180Q86T96 592 aa22.66■■□□□ 1.22
DDR1-228ENST00000376575 TSEN34Q9BSV6 310 aaKnown RBP22.66■■□□□ 1.22
DDR1-228ENST00000376575 KCNH7Q9NS40 1196 aa22.66■■□□□ 1.22
DDR1-228ENST00000376575 CCDC194A0A1B0GVG4 234 aa22.65■■□□□ 1.22
DDR1-228ENST00000376575 A6NJR5 290 aa22.65■■□□□ 1.22
DDR1-228ENST00000376575 ATP9AO75110 1047 aa22.65■■□□□ 1.22
DDR1-228ENST00000376575 GH1P01241 217 aa22.65■■□□□ 1.22
DDR1-228ENST00000376575 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.22
DDR1-228ENST00000376575 SAFBQ15424 915 aaKnown RBP eCLIP22.65■■□□□ 1.22
DDR1-228ENST00000376575 INF2Q27J81 1249 aa22.65■■□□□ 1.22
DDR1-228ENST00000376575 PIK3AP1Q6ZUJ8 805 aa22.65■■□□□ 1.22
DDR1-228ENST00000376575 SPC25Q9HBM1 224 aa22.65■■□□□ 1.22
DDR1-228ENST00000376575 FAM205CA6NFA0 338 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 C6orf222P0C671 652 aaPredicted RBP22.64■■□□□ 1.21
DDR1-228ENST00000376575 ARP10275 920 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 HOXD8P13378 290 aaPredicted RBP22.64■■□□□ 1.21
DDR1-228ENST00000376575 LAMC2Q13753 1193 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 NEDD9Q14511 834 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 FSCN1Q16658 493 aaKnown RBP22.64■■□□□ 1.21
DDR1-228ENST00000376575 Q4G0T1 1027 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 PPP4R3AQ6IN85 833 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 OR6J1Q8NGC5 347 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 DIS3LQ8TF46 1054 aaKnown RBP22.64■■□□□ 1.21
DDR1-228ENST00000376575 AP5M1Q9H0R1 490 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 BCAS3Q9H6U6 928 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 PHF24Q9UPV7 400 aa22.64■■□□□ 1.21
DDR1-228ENST00000376575 DOCK5Q9H7D0 1870 aa22.63■■□□□ 1.21
DDR1-228ENST00000376575 FARP2O94887 1054 aaPredicted RBP22.63■■□□□ 1.21
DDR1-228ENST00000376575 ZNF76P36508 570 aa22.63■■□□□ 1.21
DDR1-228ENST00000376575 SETQ01105 290 aaPredicted RBP22.63■■□□□ 1.21
DDR1-228ENST00000376575 LARP1BQ659C4 914 aaKnown RBP22.63■■□□□ 1.21
DDR1-228ENST00000376575 METTL7BQ6UX53 244 aa22.63■■□□□ 1.21
DDR1-228ENST00000376575 NEK8Q86SG6 692 aa22.63■■□□□ 1.21
DDR1-228ENST00000376575 PPTC7Q8NI37 304 aa22.63■■□□□ 1.21
DDR1-228ENST00000376575 AGO4Q9HCK5 861 aaKnown RBP22.63■■□□□ 1.21
DDR1-228ENST00000376575 DNAH12Q6ZR08 3092 aa22.63■■□□□ 1.21
DDR1-228ENST00000376575 MOXD2PA6NHM9 499 aa22.62■■□□□ 1.21
DDR1-228ENST00000376575 KIF28PB7ZC32 967 aa22.62■■□□□ 1.21
DDR1-228ENST00000376575 GGPS1O95749 300 aa22.62■■□□□ 1.21
DDR1-228ENST00000376575 BEX3Q00994 111 aa22.62■■□□□ 1.21
DDR1-228ENST00000376575 KCNA10Q16322 511 aa22.62■■□□□ 1.21
DDR1-228ENST00000376575 GNASQ5JWF2 1037 aa22.62■■□□□ 1.21
DDR1-228ENST00000376575 PLA2G4DQ86XP0 818 aa22.62■■□□□ 1.21
DDR1-228ENST00000376575 PCSK9Q8NBP7 692 aaKnown RBP22.62■■□□□ 1.21
DDR1-228ENST00000376575 GIMAP8Q8ND71 665 aaPredicted RBP22.62■■□□□ 1.21
DDR1-228ENST00000376575 PAWRQ96IZ0 340 aaKnown RBP22.62■■□□□ 1.21
DDR1-228ENST00000376575 NFASCO94856 1347 aa22.61■■□□□ 1.21
DDR1-228ENST00000376575 DHX15O43143 795 aaKnown RBP22.61■■□□□ 1.21
DDR1-228ENST00000376575 CPT1AP50416 773 aa22.61■■□□□ 1.21
DDR1-228ENST00000376575 ITGB3BPQ13352 177 aaPredicted RBP22.61■■□□□ 1.21
DDR1-228ENST00000376575 NOSTRINQ8IVI9 506 aa22.61■■□□□ 1.21
DDR1-228ENST00000376575 DHX37Q8IY37 1157 aaKnown RBP22.61■■□□□ 1.21
DDR1-228ENST00000376575 AFG1LQ8WV93 481 aa22.61■■□□□ 1.21
DDR1-228ENST00000376575 KBTBD13C9JR72 458 aa22.6■■□□□ 1.21
DDR1-228ENST00000376575 TDP2O95551 362 aa22.6■■□□□ 1.21
DDR1-228ENST00000376575 ASGR1P07306 291 aa22.6■■□□□ 1.21
DDR1-228ENST00000376575 MMP3P08254 477 aa22.6■■□□□ 1.21
DDR1-228ENST00000376575 GCFC2P16383 781 aaKnown RBP22.6■■□□□ 1.21
DDR1-228ENST00000376575 PDCP20941 246 aa22.6■■□□□ 1.21
DDR1-228ENST00000376575 ACLYP53396 1101 aa22.6■■□□□ 1.21
DDR1-228ENST00000376575 HSDL1Q3SXM5 330 aa22.6■■□□□ 1.21
DDR1-228ENST00000376575 PRR16Q569H4 304 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms