RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 C8orf37Q96NL8 207 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 PSMB7Q99436 277 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 BMP2KQ9NSY1 1161 aaPredicted RBP16.1■□□□□ 0.17
MSH5-201ENST00000375703 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 PJA2O43164 708 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 COASYQ13057 564 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 EZH2Q15910 746 aaKnown RBP16.1■□□□□ 0.17
MSH5-201ENST00000375703 ASTE1Q2TB18 679 aaPredicted RBP16.1■□□□□ 0.17
MSH5-201ENST00000375703 CCDC40Q4G0X9 1142 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 FOXR2Q6PJQ5 311 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 HDAC7Q8WUI4 952 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 HAS1Q92839 578 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 DNAJC19Q96DA6 116 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 RBM17Q96I25 401 aaKnown RBP16.1■□□□□ 0.17
MSH5-201ENST00000375703 NLRC4Q9NPP4 1024 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 PANK4Q9NVE7 773 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 SALL4Q9UJQ4 1053 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 PCDHA12Q9UN75 941 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 SSBP05455 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
MSH5-201ENST00000375703 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 SEPT2Q15019 361 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 CLEC10AQ8IUN9 316 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 GJA10Q969M2 543 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 TSPYL1Q9H0U9 437 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 DMGDHQ9UI17 866 aaKnown RBP16.1■□□□□ 0.17
MSH5-201ENST00000375703 DAGLAQ9Y4D2 1042 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 SSU72P8A0A1W2PR75 194 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 C6orf229H3BNL8 230 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 TTLL1O95922 423 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
MSH5-201ENST00000375703 NAP1L1P55209 391 aaKnown RBP16.09■□□□□ 0.17
MSH5-201ENST00000375703 GABPAQ06546 454 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 ZNF543Q08ER8 600 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
MSH5-201ENST00000375703 TDRD12Q587J7 1177 aaKnown RBP16.09■□□□□ 0.17
MSH5-201ENST00000375703 LRRC31Q6UY01 552 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 AENQ8WTP8 325 aaKnown RBP16.09■□□□□ 0.17
MSH5-201ENST00000375703 CUL5Q93034 780 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 LCMT1Q9UIC8 334 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 AGPSO00116 658 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 FAM26FQ5R3K3 315 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 TTBK2Q6IQ55 1244 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 PPP1R18Q6NYC8 613 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 CERKQ8TCT0 537 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 NOX5Q96PH1 765 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 TBC1D7Q9P0N9 293 aa16.09■□□□□ 0.17
MSH5-201ENST00000375703 PLIN4Q96Q06 1357 aa16.08■□□□□ 0.17
MSH5-201ENST00000375703 IGKV6D-41A0A0C4DH26 115 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 GOLGA6BA6NDN3 693 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 NCK2O43639 380 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 BUB1O43683 1085 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 PPP1R11O60927 126 aaPredicted RBP16.08■□□□□ 0.16
MSH5-201ENST00000375703 BBOX1O75936 387 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 CLK2P49760 499 aaKnown RBP16.08■□□□□ 0.16
MSH5-201ENST00000375703 GTF2IP78347 998 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 SLC7A5Q01650 507 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 SLC9C1Q4G0N8 1177 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 FOXR1Q6PIV2 292 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 ARHGAP27Q6ZUM4 889 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.16
MSH5-201ENST00000375703 NUCKS1Q9H1E3 243 aaKnown RBP16.08■□□□□ 0.16
MSH5-201ENST00000375703 FEZ2Q9UHY8 353 aaPredicted RBP16.08■□□□□ 0.16
MSH5-201ENST00000375703 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.16
MSH5-201ENST00000375703 CRY2Q49AN0 593 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 ZCWPW2Q504Y3 356 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 SFMBT2Q5VUG0 894 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 SND1Q7KZF4 910 aaKnown RBP eCLIP16.08■□□□□ 0.16
MSH5-201ENST00000375703 RUBCNQ92622 972 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 MTMR8Q96EF0 704 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 NT5C3AQ9H0P0 336 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 SMARCAL1Q9NZC9 954 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 CEP72Q9P209 647 aa16.08■□□□□ 0.16
MSH5-201ENST00000375703 MYO1CO00159 1063 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 SLC16A2P36021 539 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 SLC1A4P43007 532 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 FAM83BQ5T0W9 1011 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 KLHDC7AQ5VTJ3 777 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 SRLQ86TD4 932 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 TLR10Q9BXR5 811 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 EHD2Q9NZN4 543 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 RRP15Q9Y3B9 282 aaKnown RBP16.07■□□□□ 0.16
MSH5-201ENST00000375703 F8W031 263 aaPredicted RBP16.07■□□□□ 0.16
MSH5-201ENST00000375703 NOL4O94818 638 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 SERPING1P05155 500 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 NELFCDQ8IXH7 590 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 UIMC1Q96RL1 719 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 CDK5RAP2Q96SN8 1893 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
MSH5-201ENST00000375703 E9PMD0 336 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 GCFC2P16383 781 aaKnown RBP16.06■□□□□ 0.16
MSH5-201ENST00000375703 POLR2FP61218 127 aaKnown RBP16.06■□□□□ 0.16
MSH5-201ENST00000375703 CCDC65Q8IXS2 484 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 SYN2Q92777 582 aaPredicted RBP16.06■□□□□ 0.16
MSH5-201ENST00000375703 CEP63Q96MT8 703 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms