RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ZNF286BP0CG31 522 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 ATP2A2P16615 1042 aaKnown RBP16.44■□□□□ 0.22
NELFE-201ENST00000375425 RXRAP19793 462 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 GNAQP50148 359 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
NELFE-201ENST00000375425 LRRC2Q9BYS8 371 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 FTOQ9C0B1 505 aaKnown RBP eCLIP16.44■□□□□ 0.22
NELFE-201ENST00000375425 NKX2-4Q9H2Z4 354 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 MLXIPQ9HAP2 919 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 SLC28A3Q9HAS3 691 aa16.44■□□□□ 0.22
NELFE-201ENST00000375425 YBX2Q9Y2T7 364 aaKnown RBP16.44■□□□□ 0.22
NELFE-201ENST00000375425 HAS3O00219 553 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 F2P00734 622 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 ACTN1P12814 892 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
NELFE-201ENST00000375425 UBA1P22314 1058 aaKnown RBP16.43■□□□□ 0.22
NELFE-201ENST00000375425 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
NELFE-201ENST00000375425 MFSD10Q14728 455 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 USP17L6PQ6QN14 398 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 CAGE1Q8TC20 777 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 PRDM12Q9H4Q4 367 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 RTEL1Q9NZ71 1219 aa16.43■□□□□ 0.22
NELFE-201ENST00000375425 SEC63Q9UGP8 760 aaKnown RBP16.43■□□□□ 0.22
NELFE-201ENST00000375425 CALM1P0DP23 149 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 CALM2P0DP24 149 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 CALM3P0DP25 149 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 MYOGP15173 224 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 GNPTABQ3T906 1256 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 RAB11FIP4Q86YS3 637 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 CCDC155Q8N6L0 562 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 AFAP1L1Q8TED9 768 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 DHX38Q92620 1227 aaKnown RBP16.42■□□□□ 0.22
NELFE-201ENST00000375425 CUL5Q93034 780 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 GAS2L1Q99501 681 aaPredicted RBP16.42■□□□□ 0.22
NELFE-201ENST00000375425 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
NELFE-201ENST00000375425 XIRP2A4UGR9 3374 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 FRMPD4Q14CM0 1322 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 KIAA1217Q5T5P2 1943 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 PIK3CDO00329 1044 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 MEIS2O14770 477 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 STAM2O75886 525 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 SELPP16109 830 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 ICAM3P32942 547 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 ZNF200P98182 395 aaPredicted RBP16.41■□□□□ 0.22
NELFE-201ENST00000375425 GPNMBQ14956 572 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 CCDC82Q8N4S0 544 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 INPP4AQ96PE3 977 aaPredicted RBP16.41■□□□□ 0.22
NELFE-201ENST00000375425 C16orf70Q9BSU1 422 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 PCDHA11Q9Y5I1 949 aa16.41■□□□□ 0.22
NELFE-201ENST00000375425 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
NELFE-201ENST00000375425 CKBP12277 381 aa16.4■□□□□ 0.22
NELFE-201ENST00000375425 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
NELFE-201ENST00000375425 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 RBL2Q08999 1139 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 SEMA3FQ13275 785 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 PTK7Q13308 1070 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 ADGRE1Q14246 886 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 NEDD9Q14511 834 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 HIC1Q14526 733 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 LRRC8DQ7L1W4 858 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 SGMS1Q86VZ5 419 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 USP38Q8NB14 1042 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 PHOSPHO2Q8TCD6 241 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 NEK1Q96PY6 1258 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 PSTPIP2Q9H939 334 aa16.39■□□□□ 0.21
NELFE-201ENST00000375425 H3BRB1 525 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
NELFE-201ENST00000375425 FIBPO43427 364 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 PARNO95453 639 aaKnown RBP16.38■□□□□ 0.21
NELFE-201ENST00000375425 PPP2R2DQ66LE6 453 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 XRRA1Q6P2D8 792 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 METTL7BQ6UX53 244 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 TMTC3Q6ZXV5 915 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 MICU3Q86XE3 530 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 PPM1EQ8WY54 764 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 WNT8BQ93098 351 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 SLC9A7Q96T83 725 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 USP26Q9BXU7 913 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 TUT1Q9H6E5 874 aaKnown RBP16.38■□□□□ 0.21
NELFE-201ENST00000375425 MUC3AQ02505 3323 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 CUL9Q8IWT3 2517 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 SCN5AQ14524 2016 aa16.38■□□□□ 0.21
NELFE-201ENST00000375425 NBNO60934 754 aa16.37■□□□□ 0.21
NELFE-201ENST00000375425 BAIAP3O94812 1187 aa16.37■□□□□ 0.21
NELFE-201ENST00000375425 LGALS2P05162 132 aa16.37■□□□□ 0.21
NELFE-201ENST00000375425 CA3P07451 260 aa16.37■□□□□ 0.21
NELFE-201ENST00000375425 IGFBP4P22692 258 aa16.37■□□□□ 0.21
NELFE-201ENST00000375425 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
NELFE-201ENST00000375425 TRIM71Q2Q1W2 868 aaKnown RBP16.37■□□□□ 0.21
NELFE-201ENST00000375425 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
NELFE-201ENST00000375425 ZNF618Q5T7W0 954 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms