RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 GAP43P17677 238 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 DPYDQ12882 1025 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 ADAMTS1Q9UHI8 967 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 PDE6CP51160 858 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 KCTD1Q719H9 257 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 MAGOHBQ96A72 148 aaKnown RBP19■□□□□ 0.63
PTPRU-202ENST00000373779 RUNDC3BQ96NL0 473 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 AMNQ9BXJ7 453 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 GCNT4Q9P109 453 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 CEP72Q9P209 647 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 CAPN11Q9UMQ6 739 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 PALMO75781 387 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 CCDC13Q8IYE1 715 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 SERPINA10Q9UK55 444 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 ANKRD65E5RJM6 399 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 THAP12O43422 761 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 POLR2MP0CAP2 368 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 CUL1Q13616 776 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 UBE2SQ16763 222 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 TSNAXIP1Q2TAA8 658 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 ARHGEF2Q92974 986 aaKnown RBP19■□□□□ 0.63
PTPRU-202ENST00000373779 TXNDC16Q9P2K2 825 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 SLC16A2P36021 539 aa19■□□□□ 0.63
PTPRU-202ENST00000373779 TYW1Q9NV66 732 aaKnown RBP19■□□□□ 0.63
PTPRU-202ENST00000373779 LARSQ9P2J5 1176 aaKnown RBP19■□□□□ 0.63
PTPRU-202ENST00000373779 TARSL2A2RTX5 802 aaKnown RBP18.99■□□□□ 0.63
PTPRU-202ENST00000373779 CDK8P49336 464 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 ODR4Q5SWX8 454 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 PPM1KQ8N3J5 372 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 CHURC1Q8WUH1 139 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 MCUR1Q96AQ8 359 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 OSBPL9Q96SU4 736 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 PHF20Q9BVI0 1012 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
PTPRU-202ENST00000373779 TMEM131LA2VDJ0 1609 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 FAM205CA6NFA0 338 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 GFPT2O94808 682 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 PDCLQ13371 301 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 RAD9BQ6WBX8 426 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 ARMC9Q7Z3E5 817 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.99■□□□□ 0.63
PTPRU-202ENST00000373779 LMTK3Q96Q04 1460 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 PP2D1A8MPX8 630 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 VPS41P49754 854 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 SEMA3FQ13275 785 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 TADA2BQ86TJ2 420 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 CPXCR1Q8N123 301 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 AP1M1Q9BXS5 423 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 PLTPP55058 493 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 MESDQ14696 234 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 TEKT3Q9BXF9 490 aa18.99■□□□□ 0.63
PTPRU-202ENST00000373779 CLIC2O15247 247 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 TRPC3Q13507 836 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 NEDD9Q14511 834 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 COG1Q8WTW3 980 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 ZNF512BQ96KM6 892 aaPredicted RBP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 SENP2Q9HC62 589 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 CLTAP09496 248 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 FXR1P51114 621 aaKnown RBP eCLIP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 TXNRD1Q16881 649 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 NFRKBQ6P4R8 1299 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 CCDC17Q96LX7 622 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 CNOT10Q9H9A5 744 aaKnown RBP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 GFPT1Q06210 699 aaPredicted RBP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 CCDC62Q6P9F0 684 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 ELOA2Q8IYF1 753 aaPredicted RBP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 PROM2Q8N271 834 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 P3H4Q92791 437 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 RAB3IPQ96QF0 476 aaPredicted RBP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 NOVA2Q9UNW9 492 aaKnown RBP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 PVALEFA0A1B0GWK0 134 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 CYP19A1P11511 503 aaPredicted RBP18.98■□□□□ 0.63
PTPRU-202ENST00000373779 ATF2P15336 505 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 REXO1L1PQ8IX06 675 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 PLAAQ9Y263 795 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 PTPN22Q9Y2R2 807 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 MEIS1O00470 390 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 IFNAR2P48551 515 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 KCNB1Q14721 858 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 GRM4Q14833 912 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 FAM102BQ5T8I3 360 aa18.98■□□□□ 0.63
PTPRU-202ENST00000373779 TNNI1P19237 187 aa18.97■□□□□ 0.63
PTPRU-202ENST00000373779 PRDX5P30044 214 aa18.97■□□□□ 0.63
PTPRU-202ENST00000373779 RASSF2P50749 326 aa18.97■□□□□ 0.63
PTPRU-202ENST00000373779 TTLL12Q14166 644 aaPredicted RBP18.97■□□□□ 0.63
PTPRU-202ENST00000373779 ALKBH5Q6P6C2 394 aaKnown RBP18.97■□□□□ 0.63
PTPRU-202ENST00000373779 TMEM47Q9BQJ4 181 aa18.97■□□□□ 0.63
PTPRU-202ENST00000373779 MRPL11Q9Y3B7 192 aaKnown RBP18.97■□□□□ 0.63
PTPRU-202ENST00000373779 DIP2BQ9P265 1576 aa18.97■□□□□ 0.63
PTPRU-202ENST00000373779 CTNND1O60716 968 aaKnown RBP18.97■□□□□ 0.63
PTPRU-202ENST00000373779 SH3RF3Q8TEJ3 882 aaPredicted RBP18.97■□□□□ 0.63
PTPRU-202ENST00000373779 CHP1Q99653 195 aa18.97■□□□□ 0.63
PTPRU-202ENST00000373779 LRCH2Q5VUJ6 765 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 USP49Q70CQ1 688 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 TACO1Q9BSH4 297 aaKnown RBP18.96■□□□□ 0.63
PTPRU-202ENST00000373779 ACTR5Q9H9F9 607 aaPredicted RBP18.96■□□□□ 0.63
PTPRU-202ENST00000373779 FAM169AQ9Y6X4 670 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 PNMA6FA0A0J9YX94 578 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 TMED8Q6PL24 325 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms