RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 ARHGAP6O43182 974 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 METTL23Q86XA0 190 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 PALM2Q8IXS6 379 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 PPP1R12CQ9BZL4 782 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 PCDHB4Q9Y5E5 795 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 GCFC2P16383 781 aaKnown RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 SEPT6Q14141 434 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 WDR48Q8TAF3 677 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 UHMK1Q8TAS1 419 aaKnown RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 FAM76AQ8TAV0 307 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 CYP2D6P10635 497 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 KIF11P52732 1056 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 DCAF4Q8WV16 495 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 DDX27Q96GQ7 796 aaKnown RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 CFAP221Q4G0U5 840 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 FAM83BQ5T0W9 1011 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 GBP7Q8N8V2 638 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 TRIML1Q8N9V2 468 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 NSUN7Q8NE18 718 aaKnown RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 FBXO18Q8NFZ0 1043 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 KRT12Q99456 494 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 CPDO75976 1380 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 PSDA5PKW4 1024 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 PRPF3O43395 683 aaKnown RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 MMP1P03956 469 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 TUBBP07437 444 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 EIF2AK2P19525 551 aaKnown RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 ECE1P42892 770 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 PSMD2Q13200 908 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 RNF207Q6ZRF8 634 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 SZRD1Q7Z422 152 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 NBPF11Q86T75 865 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 NACC1Q96RE7 527 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 WRNIP1Q96S55 665 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 ANAPC5Q9UJX4 755 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 I3L4J1 428 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 PPP6R2O75170 966 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 JADE1Q6IE81 842 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 TAOK1Q7L7X3 1001 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 RBM46Q8TBY0 533 aaKnown RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 AK8Q96MA6 479 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 GDAP1L1Q96MZ0 367 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 HACD3Q9P035 362 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 ATICP31939 592 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 RFC1P35251 1148 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 CCDC157Q569K6 752 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 CCDC51Q96ER9 411 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 SNX25Q9H3E2 840 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 PCIF1Q9H4Z3 704 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 ANGPTL3Q9Y5C1 460 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 MFAP3P55082 362 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 ARFGAP2Q8N6H7 521 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 PSPC1Q8WXF1 523 aaKnown RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 CUEDC2Q9H467 287 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 ZHX2Q9Y6X8 837 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 ABCC12Q96J65 1359 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 PLEKHG2Q9H7P9 1386 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 BUB1O43683 1085 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 LRRC41Q15345 812 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 EPHA10Q5JZY3 1008 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 RSRC2Q7L4I2 434 aaKnown RBP10.67□□□□□ -0.7
COL4A6-202ENST00000372216 BRIP1Q9BX63 1249 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 MIS12Q9H081 205 aa10.67□□□□□ -0.7
COL4A6-202ENST00000372216 S100BP04271 92 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-202ENST00000372216 ASNSP08243 561 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 ZNF445P59923 1031 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 MUM1L1Q5H9M0 696 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 C1orf228Q6PIY5 440 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 RAPH1Q70E73 1250 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 APOBEC3FQ8IUX4 373 aaKnown RBP10.66□□□□□ -0.7
COL4A6-202ENST00000372216 CNOT6LQ96LI5 555 aaKnown RBP10.66□□□□□ -0.7
COL4A6-202ENST00000372216 STK38LQ9Y2H1 464 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 NRKQ7Z2Y5 1582 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 CARD6Q9BX69 1037 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 CDHR2Q9BYE9 1310 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 CASQ2O14958 399 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-202ENST00000372216 CLCN1P35523 988 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 PSMC2P35998 433 aaKnown RBP10.66□□□□□ -0.7
COL4A6-202ENST00000372216 NCAPGQ9BPX3 1015 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 MAD1L1Q9Y6D9 718 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 SETD1BQ9UPS6 1966 aaKnown RBP10.66□□□□□ -0.7
COL4A6-202ENST00000372216 TYW5A2RUC4 315 aaKnown RBP10.66□□□□□ -0.7
COL4A6-202ENST00000372216 THAP12O43422 761 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 ZNF18P17022 549 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 EXOC3L4Q17RC7 722 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 USP17L5A8MUK1 530 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 PRDX5P30044 214 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 ATP11AP98196 1134 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 LLGL1Q15334 1064 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 C7orf31Q8N865 590 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 OR8K1Q8NGG5 319 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 MIPOL1Q8TD10 442 aa10.66□□□□□ -0.7
COL4A6-202ENST00000372216 PPP4R1Q8TF05 950 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms