RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 KCNMA1Q12791 1236 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 PSMD2Q13200 908 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L6PQ6QN14 398 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 PANK4Q9NVE7 773 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 ABCB11O95342 1321 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 NPHP3-ACAD11A0A0J9YXS1 232 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 POLRMTO00411 1230 aaKnown RBP25.31■■□□□ 1.64
BRD3-202ENST00000371834 MRPL12P52815 198 aaKnown RBP25.31■■□□□ 1.64
BRD3-202ENST00000371834 SHROOM1Q2M3G4 852 aaPredicted RBP25.31■■□□□ 1.64
BRD3-202ENST00000371834 ANKRD13CQ8N6S4 541 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 COG1Q8WTW3 980 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 RPGRIP1Q96KN7 1286 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 COA1Q9GZY4 146 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 SNX12Q9UMY4 172 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 MYBL2P10244 700 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 NFIAQ12857 509 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 ZCWPW2Q504Y3 356 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 CDC42EP5Q6NZY7 148 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 CREG2Q8IUH2 290 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 TRIM58Q8NG06 486 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 PSMB7Q99436 277 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 LRRC27Q9C0I9 530 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 SWAP70Q9UH65 585 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 SALL4Q9UJQ4 1053 aa25.31■■□□□ 1.64
BRD3-202ENST00000371834 TRAF5O00463 557 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 TACC1O75410 805 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 GFPT1Q06210 699 aaPredicted RBP25.3■■□□□ 1.64
BRD3-202ENST00000371834 RAD51AP2Q09MP3 1159 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 ZFPM1Q8IX07 1006 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 GJD4Q96KN9 370 aaPredicted RBP25.3■■□□□ 1.64
BRD3-202ENST00000371834 KANSL2Q9H9L4 492 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 NLRC4Q9NPP4 1024 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 KIAA1024Q9UPX6 916 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 JRKLQ9Y4A0 524 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 ADAMTSL1Q8N6G6 1762 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 LTBP1Q14766 1721 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 UBAP1LF5GYI3 381 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 LCA5LO95447 670 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 FAM26FQ5R3K3 315 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 PDXDC1Q6P996 788 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 CACNA2D4Q7Z3S7 1137 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 NELFCDQ8IXH7 590 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 SP8Q8IXZ3 490 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 PSD3Q9NYI0 1048 aa25.3■■□□□ 1.64
BRD3-202ENST00000371834 TARSL2A2RTX5 802 aaKnown RBP25.29■■□□□ 1.64
BRD3-202ENST00000371834 FAM196BA6NMK8 535 aa25.29■■□□□ 1.64
BRD3-202ENST00000371834 HSP90B2PQ58FF3 399 aa25.29■■□□□ 1.64
BRD3-202ENST00000371834 COL4A3BPQ9Y5P4 624 aa25.29■■□□□ 1.64
BRD3-202ENST00000371834 MAGEA1P43355 309 aa25.29■■□□□ 1.64
BRD3-202ENST00000371834 CCDC40Q4G0X9 1142 aa25.29■■□□□ 1.64
BRD3-202ENST00000371834 GPATCH4Q5T3I0 446 aaKnown RBP25.29■■□□□ 1.64
BRD3-202ENST00000371834 ZC3H12CQ9C0D7 883 aaKnown RBP25.29■■□□□ 1.64
BRD3-202ENST00000371834 SMARCAL1Q9NZC9 954 aa25.29■■□□□ 1.64
BRD3-202ENST00000371834 ATF5Q9Y2D1 282 aaPredicted RBP25.29■■□□□ 1.64
BRD3-202ENST00000371834 POTEB3A0JP26 581 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 POTECB2RU33 542 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 CXCR5P32302 372 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 FKBP3Q00688 224 aaKnown RBP25.28■■□□□ 1.64
BRD3-202ENST00000371834 APBA1Q02410 837 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 NFRKBQ6P4R8 1299 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 POTEBQ6S5H4 581 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 MRPS25P82663 173 aaKnown RBP25.28■■□□□ 1.64
BRD3-202ENST00000371834 EZH2Q15910 746 aaKnown RBP25.28■■□□□ 1.64
BRD3-202ENST00000371834 FAM71BQ8TC56 605 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 MTMR8Q96EF0 704 aa25.28■■□□□ 1.64
BRD3-202ENST00000371834 MYH10P35580 1976 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 NCK2O43639 380 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 STAT3P40763 770 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 ZSCAN26Q16670 478 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 ASTE1Q2TB18 679 aaPredicted RBP25.27■■□□□ 1.64
BRD3-202ENST00000371834 HGSNATQ68CP4 663 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 PROM2Q8N271 834 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 HPCAL4Q9UM19 191 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 ATP6V0A2Q9Y487 856 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 KLRG2A4D1S0 409 aaPredicted RBP25.27■■□□□ 1.64
BRD3-202ENST00000371834 MCM3P25205 808 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 CACNB3P54284 484 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 RASSF7Q02833 373 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 QRICH1Q2TAL8 776 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 APOBEC3HQ6NTF7 200 aaKnown RBP25.27■■□□□ 1.64
BRD3-202ENST00000371834 CRACR2AQ9BSW2 395 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 EHD2Q9NZN4 543 aa25.27■■□□□ 1.64
BRD3-202ENST00000371834 PLA2G4BP0C869 781 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 SLC1A4P43007 532 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 MAP9Q49MG5 647 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 HDAC7Q8WUI4 952 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 DNAJC18Q9H819 358 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 SUGT1Q9Y2Z0 365 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 PCDHA2Q9Y5H9 948 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 ARFGEF1Q9Y6D6 1849 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 MYH4Q9Y623 1939 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 NOL4O94818 638 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 SYF2O95926 243 aaKnown RBP25.26■■□□□ 1.63
BRD3-202ENST00000371834 GCFC2P16383 781 aaKnown RBP25.26■■□□□ 1.63
BRD3-202ENST00000371834 TDRD12Q587J7 1177 aaKnown RBP25.26■■□□□ 1.63
BRD3-202ENST00000371834 CCNI2Q6ZMN8 369 aaPredicted RBP25.26■■□□□ 1.63
BRD3-202ENST00000371834 TMC4Q7Z404 712 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 GPBP1Q86WP2 473 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 TRERF1Q96PN7 1200 aa25.26■■□□□ 1.63
BRD3-202ENST00000371834 OSBPL9Q96SU4 736 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms