RNA–Protein interactions for RNA: ENST00000368547.3

ECHS1-201, Transcript of enoyl-CoA hydratase, short chain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHS1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1-201ENST00000368547 Q4G0T1 1027 aa33.52■■■□□ 2.96
ECHS1-201ENST00000368547 CHAMP1Q96JM3 812 aa33.52■■■□□ 2.96
ECHS1-201ENST00000368547 FTOQ9C0B1 505 aaKnown RBP eCLIP33.52■■■□□ 2.96
ECHS1-201ENST00000368547 EIF4ENIF1Q9NRA8 985 aaKnown RBP33.52■■■□□ 2.96
ECHS1-201ENST00000368547 ZHX1Q9UKY1 873 aaPredicted RBP33.52■■■□□ 2.96
ECHS1-201ENST00000368547 GRK4P32298 578 aa33.51■■■□□ 2.96
ECHS1-201ENST00000368547 GPRASP2Q96D09 838 aa33.51■■■□□ 2.96
ECHS1-201ENST00000368547 ZNF396Q96N95 335 aaPredicted RBP33.51■■■□□ 2.96
ECHS1-201ENST00000368547 PDGFCQ9NRA1 345 aa33.51■■■□□ 2.96
ECHS1-201ENST00000368547 CENPFP49454 3210 aa33.51■■■□□ 2.95
ECHS1-201ENST00000368547 ARP10275 920 aa33.5■■■□□ 2.95
ECHS1-201ENST00000368547 SETQ01105 290 aaPredicted RBP33.5■■■□□ 2.95
ECHS1-201ENST00000368547 TAPT1Q6NXT6 567 aa33.5■■■□□ 2.95
ECHS1-201ENST00000368547 POTEDQ86YR6 584 aa33.5■■■□□ 2.95
ECHS1-201ENST00000368547 USP28Q96RU2 1077 aa33.5■■■□□ 2.95
ECHS1-201ENST00000368547 KCNH7Q9NS40 1196 aa33.5■■■□□ 2.95
ECHS1-201ENST00000368547 NEMFO60524 1076 aa33.5■■■□□ 2.95
ECHS1-201ENST00000368547 CEBPZQ03701 1054 aaKnown RBP33.5■■■□□ 2.95
ECHS1-201ENST00000368547 ORC2Q13416 577 aaPredicted RBP33.5■■■□□ 2.95
ECHS1-201ENST00000368547 TFIP11Q9UBB9 837 aaKnown RBP33.5■■■□□ 2.95
ECHS1-201ENST00000368547 CLIC4Q9Y696 253 aa33.5■■■□□ 2.95
ECHS1-201ENST00000368547 TCHHQ07283 1943 aa33.49■■■□□ 2.95
ECHS1-201ENST00000368547 FIBPO43427 364 aa33.49■■■□□ 2.95
ECHS1-201ENST00000368547 CACNB2Q08289 660 aaPredicted RBP33.49■■■□□ 2.95
ECHS1-201ENST00000368547 SEMA3FQ13275 785 aa33.49■■■□□ 2.95
ECHS1-201ENST00000368547 SF3A1Q15459 793 aaKnown RBP33.49■■■□□ 2.95
ECHS1-201ENST00000368547 UIMC1Q96RL1 719 aa33.49■■■□□ 2.95
ECHS1-201ENST00000368547 SCAND2PQ9GZW5 306 aaPredicted RBP33.49■■■□□ 2.95
ECHS1-201ENST00000368547 PRDM10Q9NQV6 1147 aa33.49■■■□□ 2.95
ECHS1-201ENST00000368547 CFAP45Q9UL16 551 aa33.49■■■□□ 2.95
ECHS1-201ENST00000368547 SPATA31C2B4DYI2 1134 aa33.48■■■□□ 2.95
ECHS1-201ENST00000368547 PRPF40AO75400 957 aaKnown RBP33.48■■■□□ 2.95
ECHS1-201ENST00000368547 ZNF865P0CJ78 1059 aaPredicted RBP33.48■■■□□ 2.95
ECHS1-201ENST00000368547 ICAM3P32942 547 aa33.48■■■□□ 2.95
ECHS1-201ENST00000368547 ANO1Q5XXA6 986 aa33.48■■■□□ 2.95
ECHS1-201ENST00000368547 MRVI1Q9Y6F6 885 aa33.48■■■□□ 2.95
ECHS1-201ENST00000368547 MAFGO15525 162 aa33.47■■■□□ 2.95
ECHS1-201ENST00000368547 SCFD2Q8WU76 684 aa33.47■■■□□ 2.95
ECHS1-201ENST00000368547 CDHR1Q96JP9 859 aa33.47■■■□□ 2.95
ECHS1-201ENST00000368547 NRBP1Q9UHY1 535 aa33.47■■■□□ 2.95
ECHS1-201ENST00000368547 MSH4O15457 936 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 CYBAP13498 195 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 PRKAR2AP13861 404 aaKnown RBP33.46■■■□□ 2.95
ECHS1-201ENST00000368547 PTGDRQ13258 359 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 TRPV1Q8NER1 839 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 TMEM60Q9H2L4 133 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 PKD2L1Q9P0L9 805 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 ELP1O95163 1332 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 RBM47A0AV96 593 aaKnown RBP33.46■■■□□ 2.95
ECHS1-201ENST00000368547 TRAK2O60296 914 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 NCLP19338 710 aaKnown RBP33.46■■■□□ 2.95
ECHS1-201ENST00000368547 ADCYAP1R1P41586 468 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 CALCRLQ16602 461 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 CCDC144BQ3MJ40 725 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 SH3TC2Q8TF17 1288 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 AGO4Q9HCK5 861 aaKnown RBP33.46■■■□□ 2.95
ECHS1-201ENST00000368547 KCNMB3Q9NPA1 279 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 POLR3EQ9NVU0 708 aa33.46■■■□□ 2.95
ECHS1-201ENST00000368547 ARIH2O95376 493 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 INHAP05111 366 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 KCNV1Q6PIU1 500 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 FBXO46Q6PJ61 603 aaPredicted RBP33.45■■■□□ 2.95
ECHS1-201ENST00000368547 C4orf32Q8N8J7 132 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 ETNPPLQ8TBG4 499 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 GJA10Q969M2 543 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 ZNF577Q9BSK1 485 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 CEP131Q9UPN4 1083 aa33.45■■■□□ 2.95
ECHS1-201ENST00000368547 DOCK5Q9H7D0 1870 aa33.45■■■□□ 2.94
ECHS1-201ENST00000368547 ATP9AO75110 1047 aa33.44■■■□□ 2.94
ECHS1-201ENST00000368547 TGFB3P10600 412 aa33.44■■■□□ 2.94
ECHS1-201ENST00000368547 TTLL4Q14679 1199 aa33.44■■■□□ 2.94
ECHS1-201ENST00000368547 PKN2Q16513 984 aaKnown RBP33.44■■■□□ 2.94
ECHS1-201ENST00000368547 SLC9C1Q4G0N8 1177 aa33.44■■■□□ 2.94
ECHS1-201ENST00000368547 MAP3K21Q5TCX8 1036 aa33.44■■■□□ 2.94
ECHS1-201ENST00000368547 CCDC62Q6P9F0 684 aa33.44■■■□□ 2.94
ECHS1-201ENST00000368547 IPO5O00410 1097 aaKnown RBP33.43■■■□□ 2.94
ECHS1-201ENST00000368547 TXNP10599 105 aaKnown RBP33.43■■■□□ 2.94
ECHS1-201ENST00000368547 SP2Q02086 613 aa33.43■■■□□ 2.94
ECHS1-201ENST00000368547 TMEM63BQ5T3F8 832 aa33.43■■■□□ 2.94
ECHS1-201ENST00000368547 HAS1Q92839 578 aa33.43■■■□□ 2.94
ECHS1-201ENST00000368547 DDX41Q9UJV9 622 aaKnown RBP33.43■■■□□ 2.94
ECHS1-201ENST00000368547 C11orf97A0A1B0GVM6 126 aaPredicted RBP33.42■■■□□ 2.94
ECHS1-201ENST00000368547 TBX3O15119 743 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 MARCH6O60337 910 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 NASPP49321 788 aaPredicted RBP33.42■■■□□ 2.94
ECHS1-201ENST00000368547 PTPAQ15257 358 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 LY6KQ17RY6 165 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 IQSEC1Q6DN90 963 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 MTMR9Q96QG7 549 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 BMP15O95972 392 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 OR52Z1P0C646 297 aa33.42■■■□□ 2.94
ECHS1-201ENST00000368547 ATP2C1P98194 919 aaPredicted RBP33.42■■■□□ 2.94
ECHS1-201ENST00000368547 KCNA2P16389 499 aa33.41■■■□□ 2.94
ECHS1-201ENST00000368547 UBA1P22314 1058 aaKnown RBP33.41■■■□□ 2.94
ECHS1-201ENST00000368547 CNGA1P29973 690 aa33.41■■■□□ 2.94
ECHS1-201ENST00000368547 CCND3P30281 292 aaPredicted RBP33.41■■■□□ 2.94
ECHS1-201ENST00000368547 ITGB3BPQ13352 177 aaPredicted RBP33.41■■■□□ 2.94
ECHS1-201ENST00000368547 KLHL40Q2TBA0 621 aa33.41■■■□□ 2.94
ECHS1-201ENST00000368547 SLC5A5Q92911 643 aa33.41■■■□□ 2.94
ECHS1-201ENST00000368547 FAM20AQ96MK3 541 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms