RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 RPS6KA4O75676 772 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 ALDH3A1P30838 453 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 MAK16Q9BXY0 300 aaKnown RBP12.77□□□□□ -0.36
COPA-202ENST00000368069 TMEM260Q9NX78 707 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 GCNT4Q9P109 453 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 HDAC6Q9UBN7 1215 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 GFPT2O94808 682 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 GAP43P17677 238 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 GRIN1Q05586 938 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 PNMA8AQ86V59 439 aaPredicted RBP12.77□□□□□ -0.36
COPA-202ENST00000368069 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 DBNDD1Q9H9R9 158 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 NARFQ9UHQ1 456 aa12.77□□□□□ -0.36
COPA-202ENST00000368069 VPS41P49754 854 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 CDC37Q16543 378 aaPredicted RBP12.77□□□□□ -0.37
COPA-202ENST00000368069 ANO3Q9BYT9 981 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 TRIM7Q9C029 511 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 GJA3Q9Y6H8 435 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 LRRC53A6NM62 1247 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 DPYDQ12882 1025 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 MAIP1Q8WWC4 291 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 MLXIPQ9HAP2 919 aa12.77□□□□□ -0.37
COPA-202ENST00000368069 LRRN2O75325 713 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 NSUN4Q96CB9 384 aaKnown RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 TSNARE1Q96NA8 513 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 VGLL3A8MV65 326 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 CSRNP1Q96S65 589 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 SLIT1O75093 1534 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 UBE2Q2LH0YL09 131 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 PRPF6O94906 941 aaKnown RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 PDE6CP51160 858 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 MESDQ14696 234 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 NR1I3Q14994 352 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 GSPT2Q8IYD1 628 aaKnown RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 ST7Q9NRC1 585 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 ANO9A1A5B4 782 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 DLATP10515 647 aaKnown RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 BMP3P12645 472 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 CD19P15391 556 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 TMED8Q6PL24 325 aaPredicted RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 ZNF577Q9BSK1 485 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
COPA-202ENST00000368069 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 FEZ2Q9UHY8 353 aaPredicted RBP12.76□□□□□ -0.37
COPA-202ENST00000368069 TMC4Q7Z404 712 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 RAD54LQ92698 747 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.75□□□□□ -0.375e-6■■■■■ 31.8
COPA-202ENST00000368069 STIM2Q9P246 746 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 FCER1AP12319 257 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 KRT15P19012 456 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 FXR1P51114 621 aaKnown RBP eCLIP12.75□□□□□ -0.375e-7■■■■□ 23.1
COPA-202ENST00000368069 SNAP25P60880 206 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 NNTQ13423 1086 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 PTPAQ15257 358 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 SPATS2Q86XZ4 545 aaKnown RBP12.75□□□□□ -0.37
COPA-202ENST00000368069 SMC6Q96SB8 1091 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 CCPG1Q9ULG6 757 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 PCDHA6Q9UN73 950 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 PCDHA8Q9Y5H6 950 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 TBC1D8O95759 1140 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 APBA3O96018 575 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 SYDE2Q5VT97 1194 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 CD209Q9NNX6 404 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 C1orf112Q9NSG2 853 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 STK32BQ9NY57 414 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 NFU1Q9UMS0 254 aa12.75□□□□□ -0.37
COPA-202ENST00000368069 TBC1D10BQ4KMP7 808 aaPredicted RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 GKAP1Q5VSY0 366 aaPredicted RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 ARHGEF16Q5VV41 709 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 RAD9BQ6WBX8 426 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 VSIG1Q86XK7 387 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 MAGOHBQ96A72 148 aaKnown RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 RSRC1Q96IZ7 334 aaKnown RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 PBKQ96KB5 322 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 BHMT2Q9H2M3 363 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 FAM114A2Q9NRY5 505 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 HOXA13P31271 388 aaPredicted RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 ADCY8P40145 1251 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 ALKBH5Q6P6C2 394 aaKnown RBP12.74□□□□□ -0.37
COPA-202ENST00000368069 CHP1Q99653 195 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 E9PMD0 336 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 KCNQ2O43526 872 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 PALMO75781 387 aa12.74□□□□□ -0.37
COPA-202ENST00000368069 STAMBPO95630 424 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms