RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 IL17RAQ96F46 866 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 FBXL5Q9UKA1 691 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 FGGP02679 453 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 ANTXR2P58335 489 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 EVI5O60447 810 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 BAG2O95816 211 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 GCFC2P16383 781 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 GYG1P46976 350 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 MMGT1Q8N4V1 131 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 GRID2IPA4D2P6 1211 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 CFAP73A6NFT4 308 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 PTGISQ16647 500 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 PPP4R3AQ6IN85 833 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 GDAP1Q8TB36 358 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 MS4A14Q96JA4 679 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 TYW1Q9NV66 732 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 CPDO75976 1380 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 FERP16591 822 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 CARSP49589 748 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 ARL8AQ96BM9 186 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 RBM12Q9NTZ6 932 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 STK17AQ9UEE5 414 aa17.4■□□□□ 0.38
CLSTN1-201ENST00000361311 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 OPHN1O60890 802 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 IRX1P78414 480 aaPredicted RBP17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 PARP10Q53GL7 1025 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 SGSM3Q96HU1 749 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 SNX24Q9Y343 169 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 TFRCP02786 760 aaKnown RBP17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 LMNB1P20700 586 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 MESDQ14696 234 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 CFAP61Q8NHU2 1237 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 SYNCQ9H7C4 482 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 BATF3Q9NR55 127 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 EIF4E1BA6NMX2 242 aaKnown RBP17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 SKIP12755 728 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 CAPN12Q6ZSI9 719 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 ELOA2Q8IYF1 753 aaPredicted RBP17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 SCYL3Q8IZE3 742 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 CCDC110Q8TBZ0 833 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.37
CLSTN1-201ENST00000361311 FAM205CA6NFA0 338 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 F8W031 263 aaPredicted RBP17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 SH3BGRP55822 239 aaPredicted RBP17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 ANKRD2Q9GZV1 360 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 TFCP2L1Q9NZI6 479 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 CHMP2AO43633 222 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 RAB3IL1Q8TBN0 382 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 CYP2D7A0A087X1C5 515 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 TMTC3Q6ZXV5 915 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 ANKRD35Q8N283 1001 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 SEC16BQ96JE7 1060 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 TMOD2Q9NZR1 351 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 USTQ9Y2C2 406 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 H0Y3Z8 333 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 SETSIPP0DME0 302 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 ATF2P15336 505 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 SLC1A4P43007 532 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 ATP2C1P98194 919 aaPredicted RBP17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 SCARF1Q14162 830 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 ZNF804AQ7Z570 1209 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 SREK1Q8WXA9 508 aaKnown RBP17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 GJA10Q969M2 543 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 TBK1Q9UHD2 729 aa17.38■□□□□ 0.37
CLSTN1-201ENST00000361311 PHF20L1A8MW92 1017 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 TRIM37O94972 964 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 SRGNP10124 158 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 CYP2J2P51589 502 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 LLGL1Q15334 1064 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 ZNF449Q6P9G9 518 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 SH3GL3Q99963 347 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 SH2D4AQ9H788 454 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 VCX3AQ9NNX9 186 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 CEP72Q9P209 647 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 I3L4J1 428 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 AFPP02771 609 aaKnown RBP17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 TRAF1Q13077 416 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 RABL6Q3YEC7 729 aaPredicted RBP17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 MAPKAPK5Q8IW41 473 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 MYCBPAPQ8TBZ2 947 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 GRK7Q8WTQ7 553 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 DONSONQ9NYP3 566 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 DMGDHQ9UI17 866 aaKnown RBP17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 HSPA6P17066 643 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 TMOD1P28289 359 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 SMTNP53814 917 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 SH2D4BQ5SQS7 431 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 FAM83BQ5T0W9 1011 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 CYB5D1Q6P9G0 228 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 GLT8D2Q9H1C3 349 aa17.37■□□□□ 0.37
CLSTN1-201ENST00000361311 ZNF18P17022 549 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 KIAA1024Q9UPX6 916 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms