RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ALFQ53S48 1182 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 TBCELQ5QJ74 424 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 SEZ6L2Q6UXD5 910 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 KANSL1Q7Z3B3 1105 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 C16orf92Q96LL3 132 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 BRMS1Q9HCU9 246 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 WASH6PQ9NQA3 447 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 SRP68Q9UHB9 627 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 ADAM30Q9UKF2 790 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 INTUQ9ULD6 942 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 PSME4Q14997 1843 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 A0A088AWK7 358 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 MAFO75444 373 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARIH2O95376 493 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 ADH1CP00326 375 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 PBX2P40425 430 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 CENPCQ03188 943 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 DGKZQ13574 1117 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARMCX6Q7L4S7 300 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 BTLAQ7Z6A9 289 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 NOSTRINQ8IVI9 506 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 DNAJB8Q8NHS0 232 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 SLC22A17Q8WUG5 538 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 TMEM40Q8WWA1 233 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 B4GALT6Q9UBX8 382 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 APEX2Q9UBZ4 518 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 MIA2Q96PC5 1412 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 ERBB4Q15303 1308 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 BICDL2A1A5D9 508 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 FAM234BA2RU67 622 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 SLC26A4O43511 780 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 CBFA2T3O75081 653 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 XPAP23025 273 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 TDO2P48775 406 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 SSPNQ14714 243 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 FXNQ16595 210 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 HEATR6Q6AI08 1181 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 TTLL7Q6ZT98 887 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 USP51Q70EK9 711 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 RELL1Q8IUW5 271 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARHGEF39Q8N4T4 335 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 COG1Q8WTW3 980 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 JARID2Q92833 1246 aaPredicted RBP2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 RPGRQ92834 1020 aaKnown RBP2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 PLCD4Q9BRC7 762 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 BTBD1Q9H0C5 482 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 SLC5A4Q9NY91 659 aa2.39□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARID2Q68CP9 1835 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 DHX57Q6P158 1386 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 A0A1W2PRQ8 180 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 PRSS29PA6NIE9 313 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 UBE2CO00762 179 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 CTNND1O60716 968 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 ASLP04424 464 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 GABRB3P28472 473 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 RPL6Q02878 288 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 SEC23AQ15436 765 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 GET4Q7L5D6 327 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 GALNT4Q8N4A0 578 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 CHAC2Q8WUX2 184 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 KCTD13Q8WZ19 329 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 GCC1Q96CN9 775 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 YIPF4Q9BSR8 244 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 ANKEF1Q9NU02 776 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 DECR2Q9NUI1 292 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 CDK12Q9NYV4 1490 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 COL4A1P02462 1669 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 NHSQ6T4R5 1651 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 VSTM5A8MXK1 200 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 APBB3O95704 486 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 ITGA5P08648 1049 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 TAL1P17542 331 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 JAG1P78504 1218 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 KLF1Q13351 362 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 SF1Q15637 639 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARMC3Q5W041 872 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 RETSATQ6NUM9 610 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 C20orf204Q6ZNR8 217 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 SPATS2Q86XZ4 545 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 GIMAP1Q8WWP7 306 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 AJUBAQ96IF1 538 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 GLIS2Q9BZE0 524 aaPredicted RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 C2orf40Q9H1Z8 148 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 PLEKHA5Q9HAU0 1116 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 GMIPQ9P107 970 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 SYNPO2Q9UMS6 1093 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 F8W8V4 182 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 CSPG5O95196 566 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 MAPK8P45983 427 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 LSSP48449 732 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 TCF15Q12870 199 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 ESRP1Q6NXG1 681 aaKnown RBP2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 ANKS1BQ7Z6G8 1248 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 VSIG10LQ86VR7 867 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 TRIM59Q8IWR1 403 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 SH3RF2Q8TEC5 729 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 PHKBQ93100 1093 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 FAXDC2Q96IV6 333 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 PRR13Q9NZ81 148 aa2.38□□□□□ -2.03
SMARCAD1-202ENST00000359052 RGPD2P0DJD1 1756 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms