RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 SART1O43290 800 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 BUB1O43683 1085 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 NEMFO60524 1076 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ALDH1A1P00352 501 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 CLUP10909 449 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 KCNQ4P56696 695 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 TFAP4Q01664 338 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 SFMBT2Q5VUG0 894 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 SYT10Q6XYQ8 523 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 KCTD1Q719H9 257 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 KLHL25Q9H0H3 589 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 DPH5Q9H2P9 285 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 TAB2Q9NYJ8 693 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 PCDH11XQ9BZA7 1347 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 PCDH11YQ9BZA8 1340 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 BRD4O60885 1362 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 FAM47E-STBD1D6RA91 191 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 WASLO00401 505 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 SP100P23497 879 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 LONP1P36776 959 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ZNF157P51786 506 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 TSPY1Q01534 308 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ZBTB17Q13105 803 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ABCB5Q2M3G0 1257 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 NAA35Q5VZE5 725 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ZNF772Q68DY9 489 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 CATSPER4Q7RTX7 472 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ABTB1Q969K4 478 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 FSD1LQ9BXM9 530 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 PSTPIP2Q9H939 334 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ENTPD7Q9NQZ7 604 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 CHEK2O96017 543 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 SETSIPP0DME0 302 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 NUMBP49757 651 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 MYO1EQ12965 1108 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 OOSP2Q86WS3 158 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 NAF1Q96HR8 494 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 GDAP1L1Q96MZ0 367 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ZWILCHQ9H900 591 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ELP1O95163 1332 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 RAPGEF2Q9Y4G8 1499 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 A0A1B0GVL5 298 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 TEX28O15482 410 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 SLC16A1P53985 500 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ALDH18A1P54886 795 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 PDCLQ13371 301 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 OPTNQ96CV9 577 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ZBTB18Q99592 522 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 BICC1Q9H694 974 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 PRRG1O14668 218 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 DTNBO60941 627 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CTNNA1P35221 906 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 PTGDRQ13258 359 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CYP26C1Q6V0L0 522 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RRAGAQ7L523 313 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RNF135Q8IUD6 432 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 IFT20Q8IY31 132 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CAMKK1Q8N5S9 505 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RHPN1Q8TCX5 695 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CHAMP1Q96JM3 812 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CALN1Q9BXU9 219 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 INHBAP08476 426 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 NME3Q13232 169 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 VEPH1Q14D04 833 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 IPCEF1Q8WWN9 437 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 DCUN1D1Q96GG9 259 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 NFKBIZQ9BYH8 718 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 INTUQ9ULD6 942 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 POLR2DO15514 142 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CYBBP04839 570 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 DNM1Q05193 864 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RNF207Q6ZRF8 634 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 COMMD2Q86X83 199 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CATSPER3Q86XQ3 398 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 PHACTR3Q96KR7 559 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CCT7Q99832 543 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ADD3Q9UEY8 706 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 PRG4Q92954 1404 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 AKR1B15C9JRZ8 316 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CAVIN2O95810 425 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ATP1A1P05023 1023 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CTSHP09668 335 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ACADMP11310 421 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ATF2P15336 505 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 GUCA1AP43080 201 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 KPNA1P52294 538 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 BASP1P80723 227 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RASGRF1Q13972 1273 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ANKRD20A4Q4UJ75 823 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ANKRD20A8PQ5CZ79 823 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ANKRD20A2Q5SQ80 823 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ANKRD20A1Q5TYW2 823 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ZNF614Q8N883 585 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 SECISBP2LQ93073 1101 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ZNF577Q9BSK1 485 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 KMT5AQ9NQR1 393 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 PANK4Q9NVE7 773 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 PYGBP11216 843 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ATP6V1C1P21283 382 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms