RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 YY1P25490 414 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 FSTL1Q12841 308 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 GTF3C2Q8WUA4 911 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-201ENST00000343575 ERCC4Q92889 916 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-201ENST00000343575 FGD4Q96M96 766 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 TIGD1Q96MW7 591 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 NUDT12Q9BQG2 462 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 CCSER1Q9C0I3 900 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 EFCC1Q9HA90 598 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 NR3C2P08235 984 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 ZNF76P36508 570 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 GCLCP48506 637 aaPredicted RBP16.55■□□□□ 0.24
CXCL12-201ENST00000343575 PDIA5Q14554 519 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 ARHGEF16Q5VV41 709 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 KRBA2Q6ZNG9 492 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 VSIG10LQ86VR7 867 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 PLA2G4DQ86XP0 818 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 CKAP2LQ8IYA6 745 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 FAM133AQ8N9E0 248 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 GPRC5AQ8NFJ5 357 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 AK8Q96MA6 479 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 FUCA2Q9BTY2 467 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 WDR11Q9BZH6 1224 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 TNMDQ9H2S6 317 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 PCDHA12Q9UN75 941 aa16.55■□□□□ 0.24
CXCL12-201ENST00000343575 DNAJC25-GNG10A0A024R161 153 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 SOWAHBA6NEL2 793 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 FOXN1O15353 648 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 RGS20O76081 388 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
CXCL12-201ENST00000343575 KARSQ15046 597 aaKnown RBP16.54■□□□□ 0.24
CXCL12-201ENST00000343575 NAALADL2Q58DX5 795 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 NSUN6Q8TEA1 469 aaKnown RBP16.54■□□□□ 0.24
CXCL12-201ENST00000343575 CCDC102AQ96A19 550 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 FAM20AQ96MK3 541 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 PARK7Q99497 189 aaKnown RBP16.54■□□□□ 0.24
CXCL12-201ENST00000343575 SERTAD1Q9UHV2 236 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 PFASO15067 1338 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 BCRP11274 1271 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 DNTTIP2Q5QJE6 756 aaKnown RBP16.54■□□□□ 0.24
CXCL12-201ENST00000343575 SLC5A5Q92911 643 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 MROH8Q9H579 483 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 KCNH7Q9NS40 1196 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 VAV3Q9UKW4 847 aa16.54■□□□□ 0.24
CXCL12-201ENST00000343575 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
CXCL12-201ENST00000343575 PSMD10O75832 226 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 PGK2P07205 417 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 MYCLP12524 364 aaPredicted RBP16.53■□□□□ 0.24
CXCL12-201ENST00000343575 NOLC1Q14978 699 aaKnown RBP eCLIP16.53■□□□□ 0.24
CXCL12-201ENST00000343575 CYP4F22Q6NT55 531 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 NIPA1Q7RTP0 329 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 SLFN12Q8IYM2 578 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 MTRQ99707 1265 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 ZCCHC17Q9NP64 241 aaKnown RBP16.53■□□□□ 0.24
CXCL12-201ENST00000343575 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 LRWD1Q9UFC0 647 aa16.53■□□□□ 0.24
CXCL12-201ENST00000343575 COPB2P35606 906 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 FAM110CQ1W6H9 321 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 B3GNT9Q6UX72 402 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 SH3RF1Q7Z6J0 888 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 DNERQ8NFT8 737 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 DHX58Q96C10 678 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 SDF4Q9BRK5 362 aa16.52■□□□□ 0.24
CXCL12-201ENST00000343575 DHX15O43143 795 aaKnown RBP16.52■□□□□ 0.23
CXCL12-201ENST00000343575 EDNRBP24530 442 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 UBA7P41226 1012 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 TM4SF4P48230 202 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 ALDH5A1P51649 535 aaPredicted RBP16.52■□□□□ 0.23
CXCL12-201ENST00000343575 INHBEP58166 350 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 SEMA3FQ13275 785 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 ECM1Q16610 540 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 TMEM266Q2M3C6 531 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 XRRA1Q6P2D8 792 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 OTOP1Q7RTM1 612 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 CABP7Q86V35 215 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 ELOA2Q8IYF1 753 aaPredicted RBP16.52■□□□□ 0.23
CXCL12-201ENST00000343575 GRAMD1CQ8IYS0 662 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 INPP4AQ96PE3 977 aaPredicted RBP16.52■□□□□ 0.23
CXCL12-201ENST00000343575 PNMA5Q96PV4 448 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 DISC1Q9NRI5 854 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 CPA4Q9UI42 421 aa16.52■□□□□ 0.23
CXCL12-201ENST00000343575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
CXCL12-201ENST00000343575 POTEB2H3BUK9 544 aa16.51■□□□□ 0.23
CXCL12-201ENST00000343575 EML1O00423 815 aa16.51■□□□□ 0.23
CXCL12-201ENST00000343575 ATP9AO75110 1047 aa16.51■□□□□ 0.23
CXCL12-201ENST00000343575 SLFN14P0C7P3 912 aa16.51■□□□□ 0.23
CXCL12-201ENST00000343575 SETQ01105 290 aaPredicted RBP16.51■□□□□ 0.23
CXCL12-201ENST00000343575 GRB10Q13322 594 aa16.51■□□□□ 0.23
CXCL12-201ENST00000343575 ITGB3BPQ13352 177 aaPredicted RBP16.51■□□□□ 0.23
CXCL12-201ENST00000343575 CNNM3Q8NE01 707 aa16.51■□□□□ 0.23
CXCL12-201ENST00000343575 PLIN2Q99541 437 aa16.51■□□□□ 0.23
CXCL12-201ENST00000343575 RASSF10A6NK89 507 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 IPO5O00410 1097 aaKnown RBP16.5■□□□□ 0.23
CXCL12-201ENST00000343575 CTAGE5O15320 804 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms