RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 MYL1P05976 194 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 SPATA31C1P0DKV0 1188 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 PTGER2P43116 358 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 MTMR2Q13614 643 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 GPBP1Q86WP2 473 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 CNOT6LQ96LI5 555 aaKnown RBP17.25■□□□□ 0.35
MBD1-203ENST00000339998 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
MBD1-203ENST00000339998 COL20A1Q9P218 1284 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 PPP2R2CQ9Y2T4 447 aa17.25■□□□□ 0.35
MBD1-203ENST00000339998 ABL1P00519 1130 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 MMP14P50281 582 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 COASYQ13057 564 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 ARSHQ5FYA8 562 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 TRMT1LQ7Z2T5 733 aaKnown RBP17.24■□□□□ 0.35
MBD1-203ENST00000339998 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 TANGO6Q9C0B7 1094 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 RAVER2Q9HCJ3 691 aaKnown RBP17.24■□□□□ 0.35
MBD1-203ENST00000339998 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
MBD1-203ENST00000339998 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
MBD1-203ENST00000339998 TERF1P54274 439 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 ZNF280AP59817 542 aaPredicted RBP17.24■□□□□ 0.35
MBD1-203ENST00000339998 CTTNQ14247 550 aaKnown RBP17.24■□□□□ 0.35
MBD1-203ENST00000339998 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 ANGEL2Q5VTE6 544 aaKnown RBP17.24■□□□□ 0.35
MBD1-203ENST00000339998 CNNM4Q6P4Q7 775 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 LRRN4CLQ8ND94 238 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 TUBGCP2Q9BSJ2 902 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 VPS33BQ9H267 617 aa17.24■□□□□ 0.35
MBD1-203ENST00000339998 ZNF536O15090 1300 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 IGLV3-22A0A075B6J6 115 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 NRDCO43847 1150 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 MFAP3LO75121 409 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 SPP2Q13103 211 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 CCDC47Q96A33 483 aaKnown RBP17.23■□□□□ 0.35
MBD1-203ENST00000339998 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
MBD1-203ENST00000339998 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 MRPL44Q9H9J2 332 aaKnown RBP17.23■□□□□ 0.35
MBD1-203ENST00000339998 PANK4Q9NVE7 773 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 ABCB11O95342 1321 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 GCOM1H8Y6P7 765 aaPredicted RBP17.23■□□□□ 0.35
MBD1-203ENST00000339998 ARHGAP6O43182 974 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 POLR2MP0CAP2 368 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 ARP10275 920 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 CCDC155Q8N6L0 562 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 IL31RAQ8NI17 732 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 HOOK2Q96ED9 719 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 DNAI1Q9UI46 699 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
MBD1-203ENST00000339998 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 CYP11B2P19099 503 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 CCDC112Q8NEF3 446 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 CHP1Q99653 195 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 TTC26A0AVF1 554 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 ALAS1P13196 640 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 MTIF2P46199 727 aaKnown RBP17.22■□□□□ 0.35
MBD1-203ENST00000339998 CASP5P51878 434 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 ZNF710Q8N1W2 664 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 MB21D1Q8N884 522 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 IKZF4Q9H2S9 585 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 VAV3Q9UKW4 847 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 FLOT1O75955 427 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 ERVK-24P63145 666 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 MAP3K10Q02779 954 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 Q4G0T1 1027 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 HERC4Q5GLZ8 1057 aaPredicted RBP17.22■□□□□ 0.35
MBD1-203ENST00000339998 MUM1L1Q5H9M0 696 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 ACRBPQ8NEB7 543 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 LZTFL1Q9NQ48 299 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
MBD1-203ENST00000339998 TFR2Q9UP52 801 aa17.22■□□□□ 0.35
MBD1-203ENST00000339998 FZD9O00144 591 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 STX10O60499 249 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 FOSP01100 380 aaPredicted RBP17.21■□□□□ 0.35
MBD1-203ENST00000339998 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
MBD1-203ENST00000339998 KRT9P35527 623 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 EPS15P42566 896 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 SPAG1Q07617 926 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 TRIM65Q6PJ69 517 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 SLFN12Q8IYM2 578 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 AGPAT5Q9NUQ2 364 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 EHHADHQ08426 723 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 CENPPQ6IPU0 288 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 BHMT2Q9H2M3 363 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 EMILIN3Q9NT22 766 aa17.21■□□□□ 0.35
MBD1-203ENST00000339998 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
MBD1-203ENST00000339998 PEX10O60683 326 aa17.2■□□□□ 0.34
MBD1-203ENST00000339998 SLC12A3P55017 1021 aa17.2■□□□□ 0.34
MBD1-203ENST00000339998 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
MBD1-203ENST00000339998 ARHGAP27Q6ZUM4 889 aa17.2■□□□□ 0.34
MBD1-203ENST00000339998 WDR24Q96S15 920 aa17.2■□□□□ 0.34
MBD1-203ENST00000339998 SH2D3AQ9BRG2 576 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms