RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
SCARB1-202ENST00000339570 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 NLRP3Q96P20 1036 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 BLOC1S4Q9NUP1 217 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 BCS1LQ9Y276 419 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 TOGARAM1Q9Y4F4 1720 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 CEP95Q96GE4 821 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 ERGIC2Q96RQ1 377 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 A0A087X0T9 212 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 FAM228BP0C875 321 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 KLHL30Q0D2K2 578 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 ECM1Q16610 540 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 DCAF17Q5H9S7 520 aaPredicted RBP17.79■□□□□ 0.44
SCARB1-202ENST00000339570 SFMBT2Q5VUG0 894 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 MMGT1Q8N4V1 131 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 RETREG2Q8NC44 543 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 CASKIN2Q8WXE0 1202 aa17.79■□□□□ 0.44
SCARB1-202ENST00000339570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.79■□□□□ 0.441e-6■■■■■ 77.2
SCARB1-202ENST00000339570 ZNF233A6NK53 670 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 TMOD1P28289 359 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 LLGL1Q15334 1064 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 FAM83BQ5T0W9 1011 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 UBLCP1Q8WVY7 318 aaPredicted RBP17.78■□□□□ 0.44
SCARB1-202ENST00000339570 DPH5Q9H2P9 285 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 GOLGA8KD6RF30 607 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 MEIS1O00470 390 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 SLC9C1Q4G0N8 1177 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 HERC4Q5GLZ8 1057 aaPredicted RBP17.78■□□□□ 0.44
SCARB1-202ENST00000339570 KRT79Q5XKE5 535 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 FBXO33Q7Z6M2 555 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 IFT20Q8IY31 132 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 UHMK1Q8TAS1 419 aaKnown RBP17.78■□□□□ 0.44
SCARB1-202ENST00000339570 TSG101Q99816 390 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 PLAAQ9Y263 795 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 RAD51CO43502 376 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 COPB2P35606 906 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 GNAQP50148 359 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 HDLBPQ00341 1268 aaKnown RBP17.78■□□□□ 0.44
SCARB1-202ENST00000339570 KCNMA1Q12791 1236 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
SCARB1-202ENST00000339570 KRT25Q7Z3Z0 450 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 PNMA5Q96PV4 448 aa17.78■□□□□ 0.44
SCARB1-202ENST00000339570 DDX47Q9H0S4 455 aaKnown RBP17.78■□□□□ 0.44
SCARB1-202ENST00000339570 STAT3P40763 770 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 NFIXQ14938 502 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 TMEM266Q2M3C6 531 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 PDXDC1Q6P996 788 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 DGKHQ86XP1 1220 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 TAF4BQ92750 862 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 PURBQ96QR8 312 aaKnown RBP17.77■□□□□ 0.44
SCARB1-202ENST00000339570 C7orf25Q9BPX7 421 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 MPHOSPH10O00566 681 aaKnown RBP17.77■□□□□ 0.44
SCARB1-202ENST00000339570 TLR2O60603 784 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 RASA1P20936 1047 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 SNAP25P60880 206 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 TEX11Q8IYF3 940 aa17.77■□□□□ 0.44
SCARB1-202ENST00000339570 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.43
SCARB1-202ENST00000339570 NR1D1P20393 614 aa17.77■□□□□ 0.43
SCARB1-202ENST00000339570 GNA11P29992 359 aa17.77■□□□□ 0.43
SCARB1-202ENST00000339570 HNRNPH1P31943 449 aaKnown RBP17.77■□□□□ 0.43
SCARB1-202ENST00000339570 SLC30A10Q6XR72 485 aa17.77■□□□□ 0.43
SCARB1-202ENST00000339570 TRMT1LQ7Z2T5 733 aaKnown RBP17.77■□□□□ 0.43
SCARB1-202ENST00000339570 BAP1Q92560 729 aa17.77■□□□□ 0.43
SCARB1-202ENST00000339570 SPAG5Q96R06 1193 aa17.77■□□□□ 0.43
SCARB1-202ENST00000339570 BCAS3Q9H6U6 928 aa17.77■□□□□ 0.43
SCARB1-202ENST00000339570 SEPT11Q9NVA2 429 aaKnown RBP17.77■□□□□ 0.43
SCARB1-202ENST00000339570 KIAA1024Q9UPX6 916 aa17.77■□□□□ 0.43
SCARB1-202ENST00000339570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.77■□□□□ 0.43
SCARB1-202ENST00000339570 M0R2N6 131 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 CDK8P49336 464 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 CENPPQ6IPU0 288 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 CCDC84Q86UT8 332 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-202ENST00000339570 SETDB2Q96T68 719 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 FGRP09769 529 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 TAL1P17542 331 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-202ENST00000339570 TTBK2Q6IQ55 1244 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 MYOCDQ8IZQ8 938 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 JPH2Q9BR39 696 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-202ENST00000339570 PANK4Q9NVE7 773 aa17.76■□□□□ 0.43
SCARB1-202ENST00000339570 LSP1P33241 339 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 BTDP43251 543 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 IKZF4Q9H2S9 585 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 MSL3Q8N5Y2 521 aaKnown RBP17.75■□□□□ 0.43
SCARB1-202ENST00000339570 TIAM2Q8IVF5 1701 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 GOLGA6L10A6NI86 522 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 PAK2Q13177 524 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 MMS22LQ6ZRQ5 1243 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 UNC13DQ70J99 1090 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 CELF4Q9BZC1 486 aaKnown RBP17.75■□□□□ 0.43
SCARB1-202ENST00000339570 CD248Q9HCU0 757 aa17.75■□□□□ 0.43
SCARB1-202ENST00000339570 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 POTECB2RU33 542 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 SLC9A1P19634 815 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 ACTN3Q08043 901 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-202ENST00000339570 EMBQ6PCB8 327 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms