RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 DEFB103AP81534 67 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 PTK7Q13308 1070 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 AAK1Q2M2I8 961 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 KCNV1Q6PIU1 500 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 STOX1Q6ZVD7 989 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 SPRED2Q7Z698 418 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 SPATA33Q96N06 139 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 PIGSQ96S52 555 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 DOCK5Q9H7D0 1870 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 LCHNA4D1U4 455 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 CXCL10P02778 98 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 GSPT1P15170 499 aaKnown RBP28.29■■■□□ 2.12
CDKN3-202ENST00000335183 ZNF200P98182 395 aaPredicted RBP28.29■■■□□ 2.12
CDKN3-202ENST00000335183 GRM4Q14833 912 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 HSDL1Q3SXM5 330 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 MYSM1Q5VVJ2 828 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 FCHSD1Q86WN1 690 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 IL31RAQ8NI17 732 aa28.29■■■□□ 2.12
CDKN3-202ENST00000335183 NECAB3Q96P71 396 aaPredicted RBP28.29■■■□□ 2.12
CDKN3-202ENST00000335183 ERICH2A1L162 156 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 RBAK-RBAKDNI3L0D1 243 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 IFIT3O14879 490 aaKnown RBP28.28■■■□□ 2.12
CDKN3-202ENST00000335183 KCNQ1P51787 676 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 GRB10Q13322 594 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 TCTN1Q2MV58 587 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 CELF3Q5SZQ8 465 aaKnown RBP28.28■■■□□ 2.12
CDKN3-202ENST00000335183 TTC22Q5TAA0 569 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 VSIG10LQ86VR7 867 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 SAMD3Q8N6K7 520 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 WNT8BQ93098 351 aa28.28■■■□□ 2.12
CDKN3-202ENST00000335183 NCOR1O75376 2440 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 GCOM1H8Y6P7 765 aaPredicted RBP28.27■■■□□ 2.12
CDKN3-202ENST00000335183 PPFIA4O75335 1185 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 POLR2MP0CAP2 368 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 BMP1P13497 986 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 PDE4AP27815 886 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 CCND2P30279 289 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 TRAF1Q13077 416 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 SLC35G1Q2M3R5 365 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 ZNF618Q5T7W0 954 aa28.27■■■□□ 2.12
CDKN3-202ENST00000335183 U3KPZ7 1027 aaPredicted RBP28.27■■■□□ 2.12
CDKN3-202ENST00000335183 ABHD14A-ACY1A0A1B0GW23 586 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 CYP21A2P08686 494 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 HOXD8P13378 290 aaPredicted RBP28.26■■■□□ 2.11
CDKN3-202ENST00000335183 COL9A1P20849 921 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 UBA1P22314 1058 aaKnown RBP28.26■■■□□ 2.11
CDKN3-202ENST00000335183 SP2Q02086 613 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 TRIM71Q2Q1W2 868 aaKnown RBP28.26■■■□□ 2.11
CDKN3-202ENST00000335183 RALYLQ86SE5 291 aaKnown RBP28.26■■■□□ 2.11
CDKN3-202ENST00000335183 GPKOWQ92917 476 aaPredicted RBP eCLIP28.26■■■□□ 2.11
CDKN3-202ENST00000335183 RIOX1Q9H6W3 641 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 MLXIPQ9HAP2 919 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 SENP2Q9HC62 589 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 SIP14410 1827 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 REV3LO60673 3130 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 MICAL3Q7RTP6 2002 aa28.26■■■□□ 2.11
CDKN3-202ENST00000335183 TRANK1O15050 2925 aa28.25■■■□□ 2.11
CDKN3-202ENST00000335183 PTH1RQ03431 593 aa28.25■■■□□ 2.11
CDKN3-202ENST00000335183 IKBKEQ14164 716 aa28.25■■■□□ 2.11
CDKN3-202ENST00000335183 HIC1Q14526 733 aa28.25■■■□□ 2.11
CDKN3-202ENST00000335183 WTAPQ15007 396 aa28.25■■■□□ 2.11
CDKN3-202ENST00000335183 RUFY2Q8WXA3 655 aa28.25■■■□□ 2.11
CDKN3-202ENST00000335183 FAM117BQ6P1L5 589 aa28.24■■■□□ 2.11
CDKN3-202ENST00000335183 TRAF7Q6Q0C0 670 aa28.24■■■□□ 2.11
CDKN3-202ENST00000335183 GDPD5Q8WTR4 605 aa28.24■■■□□ 2.11
CDKN3-202ENST00000335183 MTUS1Q9ULD2 1270 aa28.24■■■□□ 2.11
CDKN3-202ENST00000335183 COG5Q9UP83 839 aa28.24■■■□□ 2.11
CDKN3-202ENST00000335183 MUC3AQ02505 3323 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 CYTH3O43739 400 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 LPXNO60711 386 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 EFCAB14O75071 495 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 GJB5O95377 273 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 TGFB3P10600 412 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 SART3Q15020 963 aaKnown RBP28.23■■■□□ 2.11
CDKN3-202ENST00000335183 NCOA7Q8NI08 942 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 PIBF1Q8WXW3 757 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 C16orf70Q9BSU1 422 aa28.23■■■□□ 2.11
CDKN3-202ENST00000335183 PNMA6FA0A0J9YX94 578 aa28.22■■■□□ 2.11
CDKN3-202ENST00000335183 THPOP40225 353 aa28.22■■■□□ 2.11
CDKN3-202ENST00000335183 MBTPS1Q14703 1052 aa28.22■■■□□ 2.11
CDKN3-202ENST00000335183 RAD9AQ99638 391 aa28.22■■■□□ 2.11
CDKN3-202ENST00000335183 TAF6LQ9Y6J9 622 aa28.22■■■□□ 2.11
CDKN3-202ENST00000335183 C17orf102A2RUQ5 167 aa28.21■■■□□ 2.11
CDKN3-202ENST00000335183 E7EWF7 191 aa28.21■■■□□ 2.11
CDKN3-202ENST00000335183 LGR5O75473 907 aa28.21■■■□□ 2.11
CDKN3-202ENST00000335183 CHMLP26374 656 aa28.21■■■□□ 2.11
CDKN3-202ENST00000335183 TROAPQ12815 778 aa28.21■■■□□ 2.11
CDKN3-202ENST00000335183 BCAS3Q9H6U6 928 aa28.21■■■□□ 2.11
CDKN3-202ENST00000335183 H3BRB1 525 aa28.2■■■□□ 2.1
CDKN3-202ENST00000335183 NOP56O00567 594 aaKnown RBP28.2■■■□□ 2.1
CDKN3-202ENST00000335183 GNPTABQ3T906 1256 aa28.2■■■□□ 2.1
CDKN3-202ENST00000335183 CATIPQ7Z7H3 387 aa28.2■■■□□ 2.1
CDKN3-202ENST00000335183 SERINC5Q86VE9 423 aa28.2■■■□□ 2.1
CDKN3-202ENST00000335183 ATP6V0A1Q93050 837 aa28.2■■■□□ 2.1
CDKN3-202ENST00000335183 HLA-CQ95604 372 aa28.2■■■□□ 2.1
CDKN3-202ENST00000335183 TUT1Q9H6E5 874 aaKnown RBP28.2■■■□□ 2.1
CDKN3-202ENST00000335183 KAT6AQ92794 2004 aa28.19■■■□□ 2.1
CDKN3-202ENST00000335183 EMSYQ7Z589 1322 aa28.19■■■□□ 2.1
CDKN3-202ENST00000335183 LINC01553A4QN01 128 aa28.19■■■□□ 2.1
CDKN3-202ENST00000335183 RSPH10B2B2RC85 870 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms