RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 HDAC7Q8WUI4 952 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 SYNRGQ9UMZ2 1314 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 TCRBV5S4A2TA0A5A2 114 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 MGRN1O60291 552 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
SF3B2-201ENST00000322535 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
SF3B2-201ENST00000322535 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
SF3B2-201ENST00000322535 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 OSBPL7Q9BZF2 842 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 GPCPD1Q9NPB8 672 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 RHBDL2Q9NX52 303 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 STK32BQ9NY57 414 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
SF3B2-201ENST00000322535 TESPA1A2RU30 521 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 E7EWF7 191 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 ATP6V1G2O95670 118 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 RXRAP19793 462 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 CASP14P31944 242 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 TUBP50607 506 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 PTGISQ16647 500 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 RTL9Q8NET4 1388 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 NDUFB5O43674 189 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 MYCLP1P12525 358 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 TRPC1P48995 793 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 SESN3P58005 492 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 CUL4BQ13620 913 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 TUBB2AQ13885 445 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 KLHL10Q6JEL2 608 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 LINC00301Q8NCQ3 95 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 TUBB2BQ9BVA1 445 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 ZWILCHQ9H900 591 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 WDR35Q9P2L0 1181 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 PCNTO95613 3336 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 NEDD4P46934 1319 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 FOXN1O15353 648 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 PPP1R37O75864 691 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 SRGNP10124 158 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 SCTRP47872 440 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 BPIFB4P59827 614 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 CRY2Q49AN0 593 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 CCDC170Q8IYT3 715 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 SMYD1Q8NB12 490 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 C8orf76Q96K31 380 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 EPB41L4AQ9HCS5 686 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-201ENST00000322535 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
SF3B2-201ENST00000322535 ZNF831Q5JPB2 1677 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 LSM1O15116 133 aaKnown RBP11.31□□□□□ -0.6
SF3B2-201ENST00000322535 DESP17661 470 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 STX17P56962 302 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 CYFIP2Q96F07 1278 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 STRBPQ96SI9 672 aaKnown RBP11.31□□□□□ -0.6
SF3B2-201ENST00000322535 PSMB7Q99436 277 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 OSBPL1AQ9BXW6 950 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 SPO11Q9Y5K1 396 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 SAR1BQ9Y6B6 198 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
SF3B2-201ENST00000322535 COBLO75128 1261 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 PRDM1O75626 825 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 HOXA10P31260 410 aaPredicted RBP11.31□□□□□ -0.6
SF3B2-201ENST00000322535 FMR1Q06787 632 aaKnown RBP eCLIP11.31□□□□□ -0.64e-7■■□□□ 11.4
SF3B2-201ENST00000322535 ANKRD20A8PQ5CZ79 823 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 TBC1D1Q86TI0 1168 aaPredicted RBP11.31□□□□□ -0.6
SF3B2-201ENST00000322535 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 TBC1D10CQ8IV04 446 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
SF3B2-201ENST00000322535 ANKRD2Q9GZV1 360 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 UBA5Q9GZZ9 404 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
SF3B2-201ENST00000322535 PDLIM1O00151 329 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 ZNF213O14771 459 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 CDC25AP30304 524 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 BAG6P46379 1132 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 POLE2P56282 527 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 PPARAQ07869 468 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 NANOGNBQ7Z5D8 188 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 SLC15A3Q8IY34 581 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 ACTR5Q9H9F9 607 aaPredicted RBP11.3□□□□□ -0.6
SF3B2-201ENST00000322535 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 SENP2Q9HC62 589 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 SLC5A4Q9NY91 659 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 GGA1Q9UJY5 639 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 MROH7-TTC4A0A0A0MT08 1334 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 XDHP47989 1333 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 B4E1Z4 1266 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 ZFYP08048 801 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms