RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 HERC4Q5GLZ8 1057 aaPredicted RBP17.76■□□□□ 0.43
SHISA2-201ENST00000319420 LDHDQ86WU2 507 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 CATSPER3Q86XQ3 398 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 FBXO41Q8TF61 875 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 TUBGCP2Q9BSJ2 902 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 CCPG1Q9ULG6 757 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 SFI1A8K8P3 1242 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 ALAS1P13196 640 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 USP11P51784 963 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 MTMR2Q13614 643 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 CTTNQ14247 550 aaKnown RBP17.76■□□□□ 0.43
SHISA2-201ENST00000319420 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 RAVER2Q9HCJ3 691 aaKnown RBP17.76■□□□□ 0.43
SHISA2-201ENST00000319420 KCNMB3Q9NPA1 279 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 STK17AQ9UEE5 414 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 FLOT1O75955 427 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 KRT9P35527 623 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 LENG9Q96B70 501 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 PURBQ96QR8 312 aaKnown RBP17.75■□□□□ 0.43
SHISA2-201ENST00000319420 PANK4Q9NVE7 773 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 LIMA1Q9UHB6 759 aaKnown RBP17.75■□□□□ 0.43
SHISA2-201ENST00000319420 ABCB11O95342 1321 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 GCOM1H8Y6P7 765 aaPredicted RBP17.75■□□□□ 0.43
SHISA2-201ENST00000319420 NFIBO00712 420 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 STX10O60499 249 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 TPM1P09493 284 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 POLR2MP0CAP2 368 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 CCNE1P24864 410 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 ETF1P62495 437 aaKnown RBP17.75■□□□□ 0.43
SHISA2-201ENST00000319420 SPP2Q13103 211 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 AP3B2Q13367 1082 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 RAD9BQ6WBX8 426 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 HOOK2Q96ED9 719 aa17.75■□□□□ 0.43
SHISA2-201ENST00000319420 EML1O00423 815 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 SPAG1Q07617 926 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 ANGEL2Q5VTE6 544 aaKnown RBP17.74■□□□□ 0.43
SHISA2-201ENST00000319420 UNC13DQ70J99 1090 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 FAM83AQ86UY5 434 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 TPH2Q8IWU9 490 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 SH2D3AQ9BRG2 576 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 NOC4LQ9BVI4 516 aaKnown RBP17.74■□□□□ 0.43
SHISA2-201ENST00000319420 GLT8D2Q9H1C3 349 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 BMP2KQ9NSY1 1161 aaPredicted RBP17.74■□□□□ 0.43
SHISA2-201ENST00000319420 ZNF541Q9H0D2 1346 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 MFAP3LO75121 409 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 MYL1P05976 194 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 SREBF1P36956 1147 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 TBC1D8BQ0IIM8 1120 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 COASYQ13057 564 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 CCDC155Q8N6L0 562 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 ACRBPQ8NEB7 543 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 ETNPPLQ8TBG4 499 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 MAP7D2Q96T17 732 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 MAGEF1Q9HAY2 307 aa17.74■□□□□ 0.43
SHISA2-201ENST00000319420 TRIM21P19474 475 aaKnown RBP17.73■□□□□ 0.43
SHISA2-201ENST00000319420 GNG11P61952 73 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 ORC2Q13416 577 aaPredicted RBP17.73■□□□□ 0.43
SHISA2-201ENST00000319420 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 TMEM119Q4V9L6 283 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 BTNL9Q6UXG8 535 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 ARHGAP27Q6ZUM4 889 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 PDCL2Q8N4E4 241 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 DHTKD1Q96HY7 919 aaPredicted RBP17.73■□□□□ 0.43
SHISA2-201ENST00000319420 WDR18Q9BV38 432 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 BHMT2Q9H2M3 363 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 TFR2Q9UP52 801 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 MRPL44Q9H9J2 332 aaKnown RBP17.73■□□□□ 0.43
SHISA2-201ENST00000319420 GREB1LQ9C091 1923 aaPredicted RBP17.73■□□□□ 0.43
SHISA2-201ENST00000319420 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 LRRC10BA6NIK2 292 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 KIF2AO00139 706 aaPredicted RBP17.73■□□□□ 0.43
SHISA2-201ENST00000319420 SYCP1Q15431 976 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 MAEAQ7L5Y9 396 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 TEPSINQ96N21 525 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 WDR24Q96S15 920 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 CHP1Q99653 195 aa17.73■□□□□ 0.43
SHISA2-201ENST00000319420 PHF20L1A8MW92 1017 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 RSPH10B2B2RC85 870 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 URI1O94763 535 aaPredicted RBP17.72■□□□□ 0.43
SHISA2-201ENST00000319420 RSPH10BP0C881 870 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 FAM26FQ5R3K3 315 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 SLFN12Q8IYM2 578 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 MB21D1Q8N884 522 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 WNK4Q96J92 1243 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 AGPAT5Q9NUQ2 364 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 CTDP1Q9Y5B0 961 aaPredicted RBP17.72■□□□□ 0.43
SHISA2-201ENST00000319420 BICDL2A1A5D9 508 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 TRAF5O00463 557 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 ABL1P00519 1130 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 LRCH2Q5VUJ6 765 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 TRPM4Q8TD43 1214 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 DNAJC19Q96DA6 116 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 WRNIP1Q96S55 665 aa17.72■□□□□ 0.43
SHISA2-201ENST00000319420 FAM207AQ9NSI2 230 aaPredicted RBP17.72■□□□□ 0.43
SHISA2-201ENST00000319420 FOSP01100 380 aaPredicted RBP17.71■□□□□ 0.43
SHISA2-201ENST00000319420 ARP10275 920 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 SLF1Q9BQI6 1058 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 NT5C3AQ9H0P0 336 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 SH2D4AQ9H788 454 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms