RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 ST7Q9NRC1 585 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 STK38LQ9Y2H1 464 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 DIP2CQ9Y2E4 1556 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 hCG_1984214I3L0E3 225 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 BBOX1O75936 387 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 SERPING1P05155 500 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 ZNF713Q8N859 430 aaPredicted RBP18.8■□□□□ 0.6
GABRB3-202ENST00000311550 PGRMC1O00264 195 aaKnown RBP18.8■□□□□ 0.6
GABRB3-202ENST00000311550 FMR1Q06787 632 aaKnown RBP eCLIP18.8■□□□□ 0.6
GABRB3-202ENST00000311550 TXNRD1Q16881 649 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 GKAP1Q5VSY0 366 aaPredicted RBP18.8■□□□□ 0.6
GABRB3-202ENST00000311550 ATP8A1Q9Y2Q0 1164 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 IFNAR2P48551 515 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 LRRC63Q05C16 580 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 CLEC4GQ6UXB4 293 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 GLG1Q92896 1179 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 AP1M1Q9BXS5 423 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 TMEM260Q9NX78 707 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.79■□□□□ 0.6
GABRB3-202ENST00000311550 CDC37Q16543 378 aaPredicted RBP18.79■□□□□ 0.6
GABRB3-202ENST00000311550 GSPT2Q8IYD1 628 aaKnown RBP18.79■□□□□ 0.6
GABRB3-202ENST00000311550 POMGNT1Q8WZA1 660 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 POLD4Q9HCU8 107 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 HDAC6Q9UBN7 1215 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 PNMA6FA0A0J9YX94 578 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 TTC26A0AVF1 554 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 HNRNPH2P55795 449 aaKnown RBP18.79■□□□□ 0.6
GABRB3-202ENST00000311550 APBA1Q02410 837 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 ARHGEF2Q92974 986 aaKnown RBP18.79■□□□□ 0.6
GABRB3-202ENST00000311550 CCDC97Q96F63 343 aaPredicted RBP18.79■□□□□ 0.6
GABRB3-202ENST00000311550 HOMER3Q9NSC5 361 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 SFI1A8K8P3 1242 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 THAP12O43422 761 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 CACNB3P54284 484 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 PLTPP55058 493 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 PSMD2Q13200 908 aa18.79■□□□□ 0.6
GABRB3-202ENST00000311550 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
GABRB3-202ENST00000311550 BMP3P12645 472 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 DMP1Q13316 513 aaPredicted RBP18.78■□□□□ 0.6
GABRB3-202ENST00000311550 KAZNQ674X7 775 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 CCDC160A6NGH7 325 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 KRT26Q7Z3Y9 468 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 BHMT2Q9H2M3 363 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 IFT88Q13099 833 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 USP49Q70CQ1 688 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 CCDC13Q8IYE1 715 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 PPFIBP2Q8ND30 876 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 VTI1AQ96AJ9 217 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 ANO3Q9BYT9 981 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 ADAM21Q9UKJ8 722 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 CLTCQ00610 1675 aaKnown RBP18.78■□□□□ 0.6
GABRB3-202ENST00000311550 PCK1P35558 622 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 NNTQ13423 1086 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 TBC1D9BQ66K14 1250 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 UNC13DQ70J99 1090 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 CDAN1Q8IWY9 1227 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 RAB20Q9NX57 234 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 NFU1Q9UMS0 254 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 DAAM1Q9Y4D1 1078 aa18.78■□□□□ 0.6
GABRB3-202ENST00000311550 MROH7-TTC4A0A0A0MT08 1334 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 RCAN1P53805 252 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 IRX3P78415 501 aaPredicted RBP18.77■□□□□ 0.6
GABRB3-202ENST00000311550 LRRC53A6NM62 1247 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 ANKRD65E5RJM6 399 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 GAP43P17677 238 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 HSPA1LP34931 641 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 CTTNQ14247 550 aaKnown RBP18.77■□□□□ 0.6
GABRB3-202ENST00000311550 CLNS1AP54105 237 aaKnown RBP18.77■□□□□ 0.6
GABRB3-202ENST00000311550 PPP2R5DQ14738 602 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 SRBD1Q8N5C6 995 aaKnown RBP18.77■□□□□ 0.6
GABRB3-202ENST00000311550 ANKFY1Q9P2R3 1169 aa18.77■□□□□ 0.6
GABRB3-202ENST00000311550 CTAGE3PQ8IX95 158 aa18.77■□□□□ 0.59
GABRB3-202ENST00000311550 KAZALD1Q96I82 304 aa18.77■□□□□ 0.59
GABRB3-202ENST00000311550 CEMIPQ8WUJ3 1361 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 TNS3Q68CZ2 1445 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 LRRIQ4A6NIV6 560 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 HNRNPDLO14979 420 aaKnown RBP18.76■□□□□ 0.59
GABRB3-202ENST00000311550 MCUR1Q96AQ8 359 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 CEP95Q96GE4 821 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 FAM84BQ96KN1 310 aaPredicted RBP18.76■□□□□ 0.59
GABRB3-202ENST00000311550 DHX9Q08211 1270 aaKnown RBP18.76■□□□□ 0.59
GABRB3-202ENST00000311550 ADCY1Q08828 1119 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 SMIM5Q71RC9 77 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 TACO1Q9BSH4 297 aaKnown RBP18.76■□□□□ 0.59
GABRB3-202ENST00000311550 COL15A1P39059 1388 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 NSFP46459 744 aaKnown RBP18.76■□□□□ 0.59
GABRB3-202ENST00000311550 SNX1Q13596 522 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 ZNF653Q96CK0 615 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 SUGCTQ9HAC7 445 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 PASKQ96RG2 1323 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 USP17L15C9J2P7 530 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 USP17L13C9JLJ4 530 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 USP17L11C9JVI0 530 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 USP17L18D6R9N7 530 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 USP17L22D6RA61 530 aa18.76■□□□□ 0.59
GABRB3-202ENST00000311550 USP17L17D6RBQ6 530 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms