RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 CCDC50Q8IVM0 306 aa20.35■□□□□ 0.85
CASD1-201ENST00000297273 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
CASD1-201ENST00000297273 COL4A3BPQ9Y5P4 624 aa20.35■□□□□ 0.85
CASD1-201ENST00000297273 ATP8B1O43520 1251 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 SLFN13Q68D06 897 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 SARSP49591 514 aaKnown RBP20.34■□□□□ 0.85
CASD1-201ENST00000297273 CTTNQ14247 550 aaKnown RBP20.34■□□□□ 0.85
CASD1-201ENST00000297273 DDX42Q86XP3 938 aaKnown RBP eCLIP20.34■□□□□ 0.85
CASD1-201ENST00000297273 LINC00116Q8NCU8 138 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 DDX47Q9H0S4 455 aaKnown RBP20.34■□□□□ 0.85
CASD1-201ENST00000297273 TCP10L2B9ZVM9 353 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 PLA2G4BP0C869 781 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 WDR78Q5VTH9 848 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 DPH6Q7L8W6 267 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 SPATA4Q8NEY3 305 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 OSBPL9Q96SU4 736 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 ATP8A1Q9Y2Q0 1164 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 JCADQ9P266 1359 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 MON2Q7Z3U7 1717 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 GOLGA6L10A0A0M3HER8 536 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 MYCLP12524 364 aaPredicted RBP20.34■□□□□ 0.85
CASD1-201ENST00000297273 KCNJ6P48051 423 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 IFI16Q16666 785 aaKnown RBP20.34■□□□□ 0.85
CASD1-201ENST00000297273 OR2W6PQ8NHA6 318 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
CASD1-201ENST00000297273 CABS1Q96KC9 395 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 CD209Q9NNX6 404 aa20.34■□□□□ 0.85
CASD1-201ENST00000297273 SEPT7Q16181 437 aaKnown RBP20.33■□□□□ 0.85
CASD1-201ENST00000297273 EIF3CLB5ME19 914 aaKnown RBP20.33■□□□□ 0.84
CASD1-201ENST00000297273 GCOM1H8Y6P7 765 aaPredicted RBP20.33■□□□□ 0.84
CASD1-201ENST00000297273 MYZAPP0CAP1 466 aa20.33■□□□□ 0.84
CASD1-201ENST00000297273 KRT5P13647 590 aa20.33■□□□□ 0.84
CASD1-201ENST00000297273 PLCB3Q01970 1234 aa20.33■□□□□ 0.84
CASD1-201ENST00000297273 ZNF211Q13398 564 aaPredicted RBP20.33■□□□□ 0.84
CASD1-201ENST00000297273 FAM83BQ5T0W9 1011 aa20.33■□□□□ 0.84
CASD1-201ENST00000297273 EIF3CQ99613 913 aaKnown RBP20.33■□□□□ 0.84
CASD1-201ENST00000297273 CAPN11Q9UMQ6 739 aa20.33■□□□□ 0.84
CASD1-201ENST00000297273 GRIPAP1Q4V328 841 aa20.33■□□□□ 0.84
CASD1-201ENST00000297273 FRMD4BQ9Y2L6 1034 aa20.33■□□□□ 0.84
CASD1-201ENST00000297273 RPL13P26373 211 aaKnown RBP20.32■□□□□ 0.84
CASD1-201ENST00000297273 TBX2Q13207 712 aaPredicted RBP20.32■□□□□ 0.84
CASD1-201ENST00000297273 IL17AQ16552 155 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 CERKLQ49MI3 558 aaPredicted RBP20.32■□□□□ 0.84
CASD1-201ENST00000297273 PNMA8AQ86V59 439 aaPredicted RBP20.32■□□□□ 0.84
CASD1-201ENST00000297273 LZTS2Q9BRK4 669 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 SERPINB2P05120 415 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 PPP1R7Q15435 360 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 MICALCLQ6ZW33 695 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 TMEM139Q8IV31 216 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 RETREG2Q8NC44 543 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 GIMAP7Q8NHV1 300 aa20.32■□□□□ 0.84
CASD1-201ENST00000297273 SLIT1O75093 1534 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 FLOT1O75955 427 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 GUCY1A3Q02108 690 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 HAUS3Q68CZ6 603 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 L1RE1Q9UN81 338 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 FANCGO15287 622 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 SLC37A4O43826 429 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 STAT1P42224 750 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 CDKAL1Q5VV42 579 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 PDXDC2PQ6P474 469 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 NUDT12Q9BQG2 462 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 IL17RBQ9NRM6 502 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 USTQ9Y2C2 406 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 ICA1Q05084 483 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 ANKRD42Q8N9B4 389 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 ZNF512BQ96KM6 892 aaPredicted RBP20.31■□□□□ 0.84
CASD1-201ENST00000297273 RBM12Q9NTZ6 932 aaKnown RBP20.31■□□□□ 0.84
CASD1-201ENST00000297273 STIM2Q9P246 746 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 USP21Q9UK80 565 aa20.31■□□□□ 0.84
CASD1-201ENST00000297273 SEMA3EO15041 775 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 H2AFZP0C0S5 128 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 COPB2P35606 906 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 H2AFVQ71UI9 128 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 RCCD1A6NED2 376 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 RASA1P20936 1047 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 PLTPP55058 493 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 HERVK_113P62684 666 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 ZNF746Q6NUN9 644 aaPredicted RBP20.3■□□□□ 0.84
CASD1-201ENST00000297273 ALKBH5Q6P6C2 394 aaKnown RBP20.3■□□□□ 0.84
CASD1-201ENST00000297273 RSRC2Q7L4I2 434 aaKnown RBP20.3■□□□□ 0.84
CASD1-201ENST00000297273 MTRQ99707 1265 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 RGL1Q9NZL6 768 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 HDAC9Q9UKV0 1011 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 FAM184BQ9ULE4 1060 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 CARSP49589 748 aaKnown RBP20.3■□□□□ 0.84
CASD1-201ENST00000297273 MESDQ14696 234 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 GRM4Q14833 912 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 TMED8Q6PL24 325 aaPredicted RBP20.3■□□□□ 0.84
CASD1-201ENST00000297273 CCDC105Q8IYK2 499 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 CCDC170Q8IYT3 715 aa20.3■□□□□ 0.84
CASD1-201ENST00000297273 ARHGEF35A5YM69 484 aa20.29■□□□□ 0.84
CASD1-201ENST00000297273 STXBP3O00186 592 aa20.29■□□□□ 0.84
CASD1-201ENST00000297273 CYTH3O43739 400 aa20.29■□□□□ 0.84
CASD1-201ENST00000297273 ZRANB2O95218 330 aaKnown RBP eCLIP20.29■□□□□ 0.84
CASD1-201ENST00000297273 GPSM2P81274 684 aa20.29■□□□□ 0.84
CASD1-201ENST00000297273 KCNH2Q12809 1159 aa20.29■□□□□ 0.84
CASD1-201ENST00000297273 COASYQ13057 564 aa20.29■□□□□ 0.84
CASD1-201ENST00000297273 MIGA2Q7L4E1 593 aa20.29■□□□□ 0.84
CASD1-201ENST00000297273 PPM1EQ8WY54 764 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms