RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 POTEEQ6S8J3 1075 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 SMYD4Q8IYR2 804 aaPredicted RBP25.63■■□□□ 1.69
PTX3-201ENST00000295927 NT5C3AQ9H0P0 336 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 ARP10275 920 aa25.62■■□□□ 1.69
PTX3-201ENST00000295927 CD44P16070 742 aaKnown RBP25.62■■□□□ 1.69
PTX3-201ENST00000295927 ZNF75DP51815 510 aa25.62■■□□□ 1.69
PTX3-201ENST00000295927 CT47A1Q5JQC4 288 aaPredicted RBP25.62■■□□□ 1.69
PTX3-201ENST00000295927 LBX2Q6XYB7 198 aa25.62■■□□□ 1.69
PTX3-201ENST00000295927 MED24O75448 989 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 ITGB5P18084 799 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 EIF2AK2P19525 551 aaKnown RBP25.61■■□□□ 1.69
PTX3-201ENST00000295927 KCNB1Q14721 858 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 ZNF658Q5TYW1 1059 aaPredicted RBP25.61■■□□□ 1.69
PTX3-201ENST00000295927 LRCH2Q5VUJ6 765 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 HAUS3Q68CZ6 603 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 ERMNQ8TAM6 284 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 PURBQ96QR8 312 aaKnown RBP25.61■■□□□ 1.69
PTX3-201ENST00000295927 RMDN3Q96TC7 470 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 HSD3B7Q9H2F3 369 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 KIAA1024Q9UPX6 916 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 POTEB3A0JP26 581 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 PPP1R3GB7ZBB8 358 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 PSMD10O75832 226 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 ERCC5P28715 1186 aaPredicted RBP25.61■■□□□ 1.69
PTX3-201ENST00000295927 PGM5Q15124 567 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 KMT5BQ4FZB7 885 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 POTEBQ6S5H4 581 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 ACAD9Q9H845 621 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 PXMP2Q9NR77 195 aa25.61■■□□□ 1.69
PTX3-201ENST00000295927 IRX3P78415 501 aaPredicted RBP25.6■■□□□ 1.69
PTX3-201ENST00000295927 MRPS9P82933 396 aaKnown RBP25.6■■□□□ 1.69
PTX3-201ENST00000295927 MOGSQ13724 837 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 OTOP1Q7RTM1 612 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 NIPA1Q7RTP0 329 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 MED15Q96RN5 788 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 ZNF577Q9BSK1 485 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 AGTPBP1Q9UPW5 1226 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 UBIAD1Q9Y5Z9 338 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 STK24Q9Y6E0 443 aa25.6■■□□□ 1.69
PTX3-201ENST00000295927 BCRP11274 1271 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 GJA5P36382 358 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 CATSPER3Q86XQ3 398 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 MB21D1Q8N884 522 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 ENOX1Q8TC92 643 aaKnown RBP25.59■■□□□ 1.69
PTX3-201ENST00000295927 SLC10A4Q96EP9 437 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 PDCD2LQ9BRP1 358 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 ASCC2Q9H1I8 757 aaPredicted RBP25.59■■□□□ 1.69
PTX3-201ENST00000295927 BTBD7Q9P203 1132 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 MYMKA6NI61 221 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 RHOBTB3O94955 611 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 RPA1P27694 616 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 ASIC1P78348 528 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 SEMA3FQ13275 785 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 ARHGEF16Q5VV41 709 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 KLHL10Q6JEL2 608 aa25.59■■□□□ 1.69
PTX3-201ENST00000295927 TRMT44Q8IYL2 757 aaKnown RBP25.59■■□□□ 1.69
PTX3-201ENST00000295927 EML1O00423 815 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 PEX10O60683 326 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 GAS7O60861 476 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 SPATA31C1P0DKV0 1188 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 PPP2R5CQ13362 524 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 FASTKD5Q7L8L6 764 aaKnown RBP25.58■■□□□ 1.69
PTX3-201ENST00000295927 WDR11Q9BZH6 1224 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 FANCLQ9NW38 375 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 CYP39A1Q9NYL5 469 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 GDAQ9Y2T3 454 aa25.58■■□□□ 1.69
PTX3-201ENST00000295927 UNCXA6NJT0 531 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 E9PMD0 336 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 IPO5O00410 1097 aaKnown RBP25.57■■□□□ 1.68
PTX3-201ENST00000295927 A1CFQ9NQ94 594 aaKnown RBP25.57■■□□□ 1.68
PTX3-201ENST00000295927 JADE2Q9NQC1 790 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 KCNH7Q9NS40 1196 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 POTEFA5A3E0 1075 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 PTMAP06454 111 aaKnown RBP25.57■■□□□ 1.68
PTX3-201ENST00000295927 MYCLP12524 364 aaPredicted RBP25.57■■□□□ 1.68
PTX3-201ENST00000295927 POTEGQ6S5H5 508 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 CHST13Q8NET6 341 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 CCDC47Q96A33 483 aaKnown RBP25.57■■□□□ 1.68
PTX3-201ENST00000295927 EIF2AK1Q9BQI3 630 aaKnown RBP25.57■■□□□ 1.68
PTX3-201ENST00000295927 LRRC27Q9C0I9 530 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 MAF1Q9H063 256 aa25.57■■□□□ 1.68
PTX3-201ENST00000295927 HERVK_113P62684 666 aa25.56■■□□□ 1.68
PTX3-201ENST00000295927 POLR3CQ9BUI4 534 aaPredicted RBP25.56■■□□□ 1.68
PTX3-201ENST00000295927 TEKT3Q9BXF9 490 aa25.56■■□□□ 1.68
PTX3-201ENST00000295927 NFE2L3Q9Y4A8 694 aa25.56■■□□□ 1.68
PTX3-201ENST00000295927 LCTP09848 1927 aa25.56■■□□□ 1.68
PTX3-201ENST00000295927 ATP1A3P13637 1013 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 HS1BP3Q53T59 392 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 GPAT2Q6NUI2 795 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 CNNM4Q6P4Q7 775 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 RIOX2Q8IUF8 465 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 RIT2Q99578 217 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 EXOC1Q9NV70 894 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 CHMP2AO43633 222 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 PLA2G4BP0C869 781 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 STX17P56962 302 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 PDE4DQ08499 809 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 SNAPC2Q13487 334 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 DYMQ7RTS9 669 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms