RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 GGCXP38435 758 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 PTK2Q05397 1052 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 SGO2Q562F6 1265 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 GOLPH3LQ9H4A5 285 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 TTC36A6NLP5 189 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 TRIM37O94972 964 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 PLCG1P19174 1290 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 CASP1P29466 404 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 ARHGAP4P98171 946 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 NDST4Q9H3R1 872 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 KCNG1Q9UIX4 513 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 CYP2D7A0A087X1C5 515 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 P4HA1P13674 534 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 CORO7P57737 925 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 TMED2Q15363 201 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 THAP9Q9H5L6 903 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 ADAMTS1Q9UHI8 967 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 GDAQ9Y2T3 454 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 SGK1O00141 431 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 INHBAP08476 426 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 MYO1EQ12965 1108 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 DLGAP5Q15398 846 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 FAM98CQ17RN3 349 aaKnown RBP17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 MMS19Q96T76 1030 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 H7C0C1 242 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 PSMC2P35998 433 aaKnown RBP17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 ATP5OP48047 213 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 UBXN2AP68543 259 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 ARHGEF16Q5VV41 709 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 TRIM50Q86XT4 487 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 KIAA0825Q8IV33 1275 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 TXLNGQ9NUQ3 528 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 MEIS1O00470 390 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 RNF8O76064 485 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 METTL13Q8N6R0 699 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 MB21D1Q8N884 522 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 SEC31BQ9NQW1 1179 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 SEPT10Q9P0V9 454 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 ECEL1O95672 775 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 MAPK4P31152 587 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 MFAP3P55082 362 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 GNPTABQ3T906 1256 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 NT5C1BQ96P26 610 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 SART1O43290 800 aaKnown RBP17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 RANBP1P43487 201 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 SCYL1Q96KG9 808 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 PIGSQ96S52 555 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 SUGCTQ9HAC7 445 aa17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 MRPL11Q9Y3B7 192 aaKnown RBP17.85■□□□□ 0.45
SH3RF1-201ENST00000284637 LTKP29376 864 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 TRIP13Q15645 432 aaPredicted RBP17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 AOC3Q16853 763 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 FBXW10Q5XX13 1052 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 ANKRD35Q8N283 1001 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 GDAP1Q8TB36 358 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 ZMAT2Q96NC0 199 aaKnown RBP17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 ANKFY1Q9P2R3 1169 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 DMP1Q13316 513 aaPredicted RBP17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 PBKQ96KB5 322 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 GCNT4Q9P109 453 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 MEFVO15553 781 aaPredicted RBP17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 NEK9Q8TD19 979 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 ANAPC5Q9UJX4 755 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 SLC20A2Q08357 652 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 COA7Q96BR5 231 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 FMO2Q99518 471 aa17.84■□□□□ 0.45
SH3RF1-201ENST00000284637 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 LRRIQ4A6NIV6 560 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 RASGRF2O14827 1237 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 POLR2BP30876 1174 aaKnown RBP17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 SLC16A2P36021 539 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 RESP18Q5W5W9 173 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 ARHGEF18Q6ZSZ5 1173 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 PDCD7Q8N8D1 485 aaKnown RBP17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 NSMCE1Q8WV22 266 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 PCIF1Q9H4Z3 704 aa17.83■□□□□ 0.45
SH3RF1-201ENST00000284637 HNRNPDLO14979 420 aaKnown RBP17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 PRPF3O43395 683 aaKnown RBP17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 SERPING1P05155 500 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 DOK7Q18PE1 504 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 CCDC93Q567U6 631 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 HAUS1Q96CS2 278 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 EMILIN3Q9NT22 766 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 ASAP1Q9ULH1 1129 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 MYL1P05976 194 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 LIFRP42702 1097 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 KCNJ6P48051 423 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 KCTD1Q719H9 257 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 SPICE1Q8N0Z3 855 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 ZNF804BA4D1E1 1349 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 H0YIN7 160 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 TNNC2P02585 160 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 PDE1BQ01064 536 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 RNASELQ05823 741 aaKnown RBP17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 GSPT2Q8IYD1 628 aaKnown RBP17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 SPZ1Q9BXG8 430 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 STK17AQ9UEE5 414 aa17.83■□□□□ 0.44
SH3RF1-201ENST00000284637 TMEM191BP0C7N4 346 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms