RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 FAM114A1Q8IWE2 563 aa19.51■□□□□ 0.71
CDKN1B-201ENST00000228872 P2RX5Q93086 422 aa19.51■□□□□ 0.71
CDKN1B-201ENST00000228872 MTMR8Q96EF0 704 aa19.51■□□□□ 0.71
CDKN1B-201ENST00000228872 TLDC1Q6P9B6 456 aa19.51■□□□□ 0.71
CDKN1B-201ENST00000228872 IQCDQ96DY2 449 aa19.51■□□□□ 0.71
CDKN1B-201ENST00000228872 TSKSQ9UJT2 592 aa19.51■□□□□ 0.71
CDKN1B-201ENST00000228872 EPHB6O15197 1021 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 NKRFO15226 690 aaKnown RBP eCLIP19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 GNAT2P19087 354 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 CCNE1P24864 410 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 TM4SF1P30408 202 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 QPCTQ16769 361 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 ANKRD40Q6AI12 368 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 C4orf32Q8N8J7 132 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 ENAHQ8N8S7 591 aaPredicted RBP19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 NOX5Q96PH1 765 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 TRAPPC3O43617 180 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 CLNS1AP54105 237 aaKnown RBP19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 TRADDQ15628 312 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 KRT12Q99456 494 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 ATP6V0A4Q9HBG4 840 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 PLCB1Q9NQ66 1216 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 RBM28Q9NW13 759 aaKnown RBP19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 SLC12A6Q9UHW9 1150 aa19.5■□□□□ 0.71
CDKN1B-201ENST00000228872 GOLGA6L10A6NI86 522 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 PPP1R12AO14974 1030 aaPredicted RBP19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 BUB1O43683 1085 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 E2F5Q15329 346 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 CDC37Q16543 378 aaPredicted RBP19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 LRCH2Q5VUJ6 765 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 LRIG3Q6UXM1 1119 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 CNBD1Q8NA66 436 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 TBC1D22AQ8WUA7 517 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 PNPLA7Q6ZV29 1317 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 MYH2Q9UKX2 1941 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 BICDL2A1A5D9 508 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 ADAMTS3O15072 1205 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 SCTRP47872 440 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 LACTB2Q53H82 288 aaPredicted RBP19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 CATIPQ7Z7H3 387 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 GPIHBP1Q8IV16 184 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 ESR2Q92731 530 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 SEC16BQ96JE7 1060 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 LEMD3Q9Y2U8 911 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 MYH10P35580 1976 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 NRXN2Q9P2S2 1712 aa19.49■□□□□ 0.71
CDKN1B-201ENST00000228872 NEBLO76041 1014 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 ECM2O94769 699 aaPredicted RBP19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 MYL1P05976 194 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 NLRP5P59047 1200 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 BYSLQ13895 437 aaKnown RBP19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 RASSF8Q8NHQ8 419 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 SIK3Q9Y2K2 1263 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 C5orf60A6NFR6 353 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 PP2D1A8MPX8 630 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 ERCC3P19447 782 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 SLC8A1P32418 973 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 BCAMP50895 628 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 RASSF7Q02833 373 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 IFFO1Q0D2I5 559 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 SEMA3FQ13275 785 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 XRCC4Q13426 336 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 TMTC3Q6ZXV5 915 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 FAM207AQ9NSI2 230 aaPredicted RBP19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 CNTNAP5Q8WYK1 1306 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 A0A1B0GUA9 196 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 GCOM1H8Y6P7 765 aaPredicted RBP19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 OPLAHO14841 1288 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 MYZAPP0CAP1 466 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 PPARDQ03181 441 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 PRR5LQ6MZQ0 368 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 RNF10Q8N5U6 811 aaKnown RBP19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 ZSCAN10Q96SZ4 725 aaPredicted RBP19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 KBTBD4Q9NVX7 518 aa19.48■□□□□ 0.71
CDKN1B-201ENST00000228872 RTN2O75298 545 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 IFIT1BQ5T764 474 aaKnown RBP19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 PLIN2Q99541 437 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 MINPP1Q9UNW1 487 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 GRID2IPA4D2P6 1211 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 SLC1A4P43007 532 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 RPS8P62241 208 aaKnown RBP19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 GFPT1Q06210 699 aaPredicted RBP19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 FMNL3Q8IVF7 1028 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 CACNA2D3Q8IZS8 1091 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 FLAD1Q8NFF5 587 aa19.47■□□□□ 0.71
CDKN1B-201ENST00000228872 QSER1Q2KHR3 1735 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 LRRC53A6NM62 1247 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 MINDY4BA8MYZ0 360 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 H0YGN5 161 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 SMIM22K7EJ46 135 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 RAD51CO43502 376 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 TMOD1P28289 359 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 HSD17B3P37058 310 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 DNA2P51530 1060 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 TROAPQ12815 778 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 ASTE1Q2TB18 679 aaPredicted RBP19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 RRAGAQ7L523 313 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 TFCP2L1Q9NZI6 479 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 NFS1Q9Y697 457 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms