RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SDF4Q9BRK5 362 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 TINF2Q9BSI4 451 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 SCAND2PQ9GZW5 306 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-220ENST00000641570 VTA1Q9NP79 307 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 RTEL1Q9NZ71 1219 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 COL20A1Q9P218 1284 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 MRVI1Q9Y6F6 885 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 RPTORQ8N122 1335 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 DNAJC25-GNG10A0A024R161 153 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 SOWAHBA6NEL2 793 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 LAD1O00515 517 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 FIBPO43427 364 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 COBLO75128 1261 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 CYP3A4P08684 503 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 HOXC6P09630 235 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 XRCC5P13010 732 aaKnown RBP14.67□□□□□ -0.06
PHGDH-220ENST00000641570 TTLL4Q14679 1199 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 ANO1Q5XXA6 986 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 OLFML2BQ68BL8 750 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 PPP4R3AQ6IN85 833 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 SEPT14Q6ZU15 432 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 EEPD1Q7L9B9 569 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 SLFN12Q8IYM2 578 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 SLAIN1Q8ND83 568 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 KCNG4Q8TDN1 519 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 SPATA32Q96LK8 384 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 PURBQ96QR8 312 aaKnown RBP14.67□□□□□ -0.06
PHGDH-220ENST00000641570 MXRA8Q9BRK3 442 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 ZNF577Q9BSK1 485 aa14.67□□□□□ -0.06
PHGDH-220ENST00000641570 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-220ENST00000641570 FRMPD4Q14CM0 1322 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 FAM205CA6NFA0 338 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 MAFGO15525 162 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 DDIT3P35638 169 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 DNM1Q05193 864 aaKnown RBP14.66□□□□□ -0.06
PHGDH-220ENST00000641570 NIPA1Q7RTP0 329 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 VSIG10LQ86VR7 867 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 GIMAP8Q8ND71 665 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-220ENST00000641570 RASSF8Q8NHQ8 419 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 SCFD2Q8WU76 684 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 GPRASP2Q96D09 838 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 ABHD16BQ9H3Z7 469 aa14.66□□□□□ -0.06
PHGDH-220ENST00000641570 ADCY3O60266 1144 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 GAS7O60861 476 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 TDP2O95551 362 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 YEATS4O95619 227 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 HMGCRP04035 888 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 OR52Z1P0C646 297 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 CNGA1P29973 690 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 TXLNAP40222 546 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 ME1P48163 572 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 IRF5Q13568 498 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 Q4G0T1 1027 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 EARS2Q5JPH6 523 aaKnown RBP14.65□□□□□ -0.06
PHGDH-220ENST00000641570 FBXO16Q8IX29 292 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-220ENST00000641570 NPLOC4Q8TAT6 608 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 TNPO1Q92973 898 aaKnown RBP14.65□□□□□ -0.06
PHGDH-220ENST00000641570 JADE2Q9NQC1 790 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 POLR3EQ9NVU0 708 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 PKD2L1Q9P0L9 805 aa14.65□□□□□ -0.06
PHGDH-220ENST00000641570 PLXNB2O15031 1838 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 NOP56O00567 594 aaKnown RBP14.64□□□□□ -0.07
PHGDH-220ENST00000641570 FOXN1O15353 648 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
PHGDH-220ENST00000641570 CIITAP33076 1130 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 LBX1P52954 281 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 NEDD9Q14511 834 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 NBR1Q14596 966 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 BRDTQ58F21 947 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-220ENST00000641570 FAM173BQ6P4H8 233 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 DTHD1Q6ZMT9 781 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 OTOP1Q7RTM1 612 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 CTU1Q7Z7A3 348 aaKnown RBP14.64□□□□□ -0.07
PHGDH-220ENST00000641570 POTEDQ86YR6 584 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 IL31RAQ8NI17 732 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 ERMNQ8TAM6 284 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 FAM20AQ96MK3 541 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 TEKT3Q9BXF9 490 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 MLXIPQ9HAP2 919 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 SPC25Q9HBM1 224 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 TBC1D22BQ9NU19 505 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 TFIP11Q9UBB9 837 aaKnown RBP14.64□□□□□ -0.07
PHGDH-220ENST00000641570 NRBP1Q9UHY1 535 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 GABRQQ9UN88 632 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 PCDHB6Q9Y5E3 794 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 STK24Q9Y6E0 443 aa14.64□□□□□ -0.07
PHGDH-220ENST00000641570 CYP3A7-CYP3A51PA0A087WV96 503 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 TBX3O15119 743 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 SPTLC2O15270 562 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 CYP3A7P24462 503 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 EDNRBP24530 442 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 PTGDRQ13258 359 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 ACVR2BQ13705 512 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 PKN2Q16513 984 aaKnown RBP14.63□□□□□ -0.07
PHGDH-220ENST00000641570 SLC9C1Q4G0N8 1177 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 LRCH2Q5VUJ6 765 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 MAMDC4Q6UXC1 1216 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 FERMT2Q96AC1 680 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 USP28Q96RU2 1077 aa14.63□□□□□ -0.07
PHGDH-220ENST00000641570 WDR11Q9BZH6 1224 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms