RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 RNF26Q9BY78 433 aaPredicted RBP16.39■□□□□ 0.21
SDHD-209ENST00000640554 UPF3BQ9BZI7 483 aaKnown RBP16.39■□□□□ 0.21
SDHD-209ENST00000640554 SMCHD1A6NHR9 2005 aa16.39■□□□□ 0.21
SDHD-209ENST00000640554 A0A0U1RQG5 324 aaPredicted RBP16.38■□□□□ 0.21
SDHD-209ENST00000640554 MYADML2A6NDP7 307 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 A6NJR5 290 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 DCDC2CA8MYV0 355 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 SCG2P13521 617 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 NAPAP54920 295 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 LAMC2Q13753 1193 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 WWC2Q6AWC2 1192 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 ANKRD33Q7Z3H0 272 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
SDHD-209ENST00000640554 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 EMID1Q96A84 441 aaPredicted RBP16.38■□□□□ 0.21
SDHD-209ENST00000640554 RIC8AQ9NPQ8 531 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 DDX41Q9UJV9 622 aaKnown RBP16.38■□□□□ 0.21
SDHD-209ENST00000640554 ATP11BQ9Y2G3 1177 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
SDHD-209ENST00000640554 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
SDHD-209ENST00000640554 ESYT2A0FGR8 921 aa16.37■□□□□ 0.21
SDHD-209ENST00000640554 CPLX1O14810 134 aa16.37■□□□□ 0.21
SDHD-209ENST00000640554 BEX3Q00994 111 aa16.37■□□□□ 0.21
SDHD-209ENST00000640554 NTRK3Q16288 839 aa16.37■□□□□ 0.21
SDHD-209ENST00000640554 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
SDHD-209ENST00000640554 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
SDHD-209ENST00000640554 SMCO2A6NFE2 343 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 STXBP3O00186 592 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 ARVCFO00192 962 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 MAFGO15525 162 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 CDKL5O76039 1030 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 GNA11P29992 359 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 ICAM3P32942 547 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 CDK7P50613 346 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 ADCY7P51828 1080 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 TLE2Q04725 743 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
SDHD-209ENST00000640554 GPKOWQ92917 476 aaPredicted RBP eCLIP16.36■□□□□ 0.21
SDHD-209ENST00000640554 INPP4AQ96PE3 977 aaPredicted RBP16.36■□□□□ 0.21
SDHD-209ENST00000640554 A0A1W2PPC1 479 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 TLR3O15455 904 aaKnown RBP16.35■□□□□ 0.21
SDHD-209ENST00000640554 ARIH2O95376 493 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 BMP8BP34820 402 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 CCT2P78371 535 aaKnown RBP16.35■□□□□ 0.21
SDHD-209ENST00000640554 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
SDHD-209ENST00000640554 AP3B2Q13367 1082 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 LY6KQ17RY6 165 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 TRIM60Q495X7 471 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 TMEM63BQ5T3F8 832 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 CXCL17Q6UXB2 119 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 DHX37Q8IY37 1157 aaKnown RBP16.35■□□□□ 0.21
SDHD-209ENST00000640554 SLC43A3Q8NBI5 491 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
SDHD-209ENST00000640554 CCDC148Q8NFR7 591 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 BICD2Q8TD16 824 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
SDHD-209ENST00000640554 SENP7Q9BQF6 1050 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 MTG1Q9BT17 334 aaPredicted RBP16.35■□□□□ 0.21
SDHD-209ENST00000640554 ZMYND12Q9H0C1 365 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 C6orf50Q9HD87 102 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 SH3GLB2Q9NR46 395 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 PCDHA6Q9UN73 950 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 PCDHA8Q9Y5H6 950 aa16.35■□□□□ 0.21
SDHD-209ENST00000640554 BAZ2BQ9UIF8 2168 aaKnown RBP16.34■□□□□ 0.21
SDHD-209ENST00000640554 FRMPD3Q5JV73 1810 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 SPATA31C2B4DYI2 1134 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 FIBPO43427 364 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 PPFIA4O75335 1185 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 RGS20O76081 388 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 SEC24BO95487 1268 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 MRPS9P82933 396 aaKnown RBP16.34■□□□□ 0.21
SDHD-209ENST00000640554 PURAQ00577 322 aaKnown RBP16.34■□□□□ 0.21
SDHD-209ENST00000640554 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 ITGA7Q13683 1181 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 NEDD9Q14511 834 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 DGKDQ16760 1214 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 C8orf34Q49A92 452 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 IL31RAQ8NI17 732 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
SDHD-209ENST00000640554 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
SDHD-209ENST00000640554 ZMYND8Q9ULU4 1186 aaPredicted RBP16.34■□□□□ 0.21
SDHD-209ENST00000640554 LCTP09848 1927 aa16.33■□□□□ 0.21
SDHD-209ENST00000640554 PFKFB2O60825 505 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 DEXIO95424 95 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 CLTBP09497 229 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 NEK4P51957 841 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 IRX5P78411 483 aaPredicted RBP16.33■□□□□ 0.2
SDHD-209ENST00000640554 PTPN11Q06124 597 aaPredicted RBP16.33■□□□□ 0.2
SDHD-209ENST00000640554 PKN1Q16512 942 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.2
SDHD-209ENST00000640554 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 PPTC7Q8NI37 304 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 COPS5Q92905 334 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 PHKBQ93100 1093 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 GPRASP2Q96D09 838 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 GDF15Q99988 308 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 UPF2Q9HAU5 1272 aaKnown RBP16.33■□□□□ 0.2
SDHD-209ENST00000640554 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms