RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 KCNA2P16389 499 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 MRPL10Q7Z7H8 261 aaKnown RBP7.48□□□□□ -1.21
RTTN-215ENST00000639487 SCML4Q8N228 414 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 WTIPA6NIX2 430 aaPredicted RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 CYTH3O43739 400 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 PPP1R11O60927 126 aaPredicted RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 PSMD10O75832 226 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 PDCP20941 246 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 GNA11P29992 359 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 ANP32AP39687 249 aaKnown RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 MARSP56192 900 aaKnown RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 SP3Q02447 781 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 CBLBQ13191 982 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 SH3RF1Q7Z6J0 888 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 C4orf19Q8IY42 314 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 WRNIP1Q96S55 665 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 CHST12Q9NRB3 414 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 BTBD7Q9P203 1132 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 VWA8A3KMH1 1905 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 PARP1P09874 1014 aaKnown RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 CTGFP29279 349 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 LAMC2Q13753 1193 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 DIXDC1Q155Q3 683 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 ZNF484Q5JVG2 852 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 OTOP1Q7RTM1 612 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 CATIPQ7Z7H3 387 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 MIGA1Q8NAN2 632 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 TMEM134Q9H6X4 195 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 COMMD8Q9NX08 183 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 SHTN1A0MZ66 631 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 USP5P45974 858 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 FOXD4L5Q5VV16 416 aaPredicted RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 ZNF410Q86VK4 478 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 PNMA1Q8ND90 353 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 NUP133Q8WUM0 1156 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 SPIRE2Q8WWL2 714 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 FOXD4L4Q8WXT5 416 aaPredicted RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 MOV10L1Q9BXT6 1211 aaKnown RBP7.47□□□□□ -1.21
RTTN-215ENST00000639487 BOLA2Q9H3K6 86 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 HPSEQ9Y251 543 aa7.47□□□□□ -1.21
RTTN-215ENST00000639487 SYNRGQ9UMZ2 1314 aa7.46□□□□□ -1.21
RTTN-215ENST00000639487 RRN3P2A6NIE6 340 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 SCG2P13521 617 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 PROZP22891 400 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 ADD1P35611 737 aaKnown RBP7.46□□□□□ -1.22
RTTN-215ENST00000639487 WTAPQ15007 396 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 KCNH6Q9H252 994 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 RETREG1Q9H6L5 497 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 CYP46A1Q9Y6A2 500 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 CCL15-CCL14A0A0B4J2E2 113 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 SMIM35A0A1B0GVV1 85 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 ASAP2O43150 1006 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 GUCY2CP25092 1073 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 CCND2P30279 289 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 PSEN1P49768 467 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 SMAD3P84022 425 aaKnown RBP7.46□□□□□ -1.22
RTTN-215ENST00000639487 ATP2C1P98194 919 aaPredicted RBP7.46□□□□□ -1.22
RTTN-215ENST00000639487 DSC3Q14574 896 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 CCL15Q16663 113 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 LRIT3Q3SXY7 679 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 SLFN13Q68D06 897 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 CCDC155Q8N6L0 562 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 TAF4BQ92750 862 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 FERMT2Q96AC1 680 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 BPIFA3Q9BQP9 254 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 JPH2Q9BR39 696 aaPredicted RBP7.46□□□□□ -1.22
RTTN-215ENST00000639487 RPAP3Q9H6T3 665 aaPredicted RBP7.46□□□□□ -1.22
RTTN-215ENST00000639487 SEL1LQ9UBV2 794 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 ANAPC1Q9H1A4 1944 aa7.46□□□□□ -1.22
RTTN-215ENST00000639487 C10orf142B7Z368 130 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 FSCN2O14926 492 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 RAD21O60216 631 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 HTRA4P83105 476 aaPredicted RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 KRT76Q01546 638 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 ARHGAP1Q07960 439 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 CRHR2Q13324 411 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 PGM5Q15124 567 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 KIAA0825Q8IV33 1275 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 SYTL5Q8TDW5 730 aaPredicted RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 WDR11Q9BZH6 1224 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 RTEL1Q9NZ71 1219 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 PTPRJQ12913 1337 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 CNTNAP2Q9UHC6 1331 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 PLIN1O60240 522 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 SNAI1O95863 264 aaPredicted RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 VASPP50552 380 aaPredicted RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 TBC1D10BQ4KMP7 808 aaPredicted RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 RNF43Q68DV7 783 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 SLC51AQ86UW1 340 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 ADGRF4Q8IZF3 695 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 ZNF444Q8N0Y2 327 aaPredicted RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 PCSK9Q8NBP7 692 aaKnown RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 HERVK_113Q902F9 699 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 MXRA8Q9BRK3 442 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 CCDC113Q9H0I3 377 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 MCM9Q9NXL9 1143 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 DDX20Q9UHI6 824 aaKnown RBP7.45□□□□□ -1.22
RTTN-215ENST00000639487 RWDD3Q9Y3V2 267 aa7.45□□□□□ -1.22
RTTN-215ENST00000639487 TTC3P53804 2025 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms