RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 CDC37Q16543 378 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 QPCTQ16769 361 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 GKAP1Q5VSY0 366 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 CCDC84Q86UT8 332 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 ZSCAN29Q8IWY8 852 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 BLIDQ8IZY5 108 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 SRBD1Q8N5C6 995 aaKnown RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 RASGRP4Q8TDF6 673 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 HVCN1Q96D96 273 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 TRIM6Q9C030 488 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 TAF1DQ9H5J8 278 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 FCER1AP12319 257 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 ERCC3P19447 782 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 HSD17B3P37058 310 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 PPP2R2AP63151 447 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 EHHADHQ08426 723 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 STK4Q13043 487 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 BIRC3Q13489 604 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 ATP6V0A4Q9HBG4 840 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 KBTBD4Q9NVX7 518 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 PACSIN2Q9UNF0 486 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 LEMD3Q9Y2U8 911 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 SNAP23O00161 211 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 OPLAHO14841 1288 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 TRAPPC3O43617 180 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 TROAPQ12815 778 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 MAN2A1Q16706 1144 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 ARMC9Q7Z3E5 817 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 FAM228AQ86W67 206 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 MAGEC3Q8TD91 643 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 TBC1D31Q96DN5 1066 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 TCP11L1Q9NUJ3 509 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 TRMT112Q9UI30 125 aaKnown RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 NOVA2Q9UNW9 492 aaKnown RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 GLI3P10071 1580 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 CYP2D7A0A087X1C5 515 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 CCDC189A1A4V9 331 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 SMIM22K7EJ46 135 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 FGFR1OPO95684 399 aaKnown RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 PLCG1P19174 1290 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 PPP1R7Q15435 360 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 SPRED3Q2MJR0 410 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 SLC9C1Q4G0N8 1177 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 CNNM4Q6P4Q7 775 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 PDXDC1Q6P996 788 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 TOM1L2Q6ZVM7 507 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 CABP7Q86V35 215 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 KIRREL3Q8IZU9 778 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 C4orf32Q8N8J7 132 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD2-226ENST00000636881 NLRC4Q9NPP4 1024 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 ABCF2Q9UG63 623 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 SIK3Q9Y2K2 1263 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 MROH5Q6ZUA9 1318 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 PFKFB3Q16875 520 aaPredicted RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 HIBCHQ6NVY1 386 aaPredicted RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 DHX37Q8IY37 1157 aaKnown RBP9.38□□□□□ -0.91
CHD2-226ENST00000636881 RAPGEF5Q92565 580 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 P3H4Q92791 437 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 CCSER1Q9C0I3 900 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 ISCUQ9H1K1 167 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 TMEM60Q9H2L4 133 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 SLC39A2Q9NP94 309 aa9.38□□□□□ -0.91
CHD2-226ENST00000636881 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 ADAMTS3O15072 1205 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 NKRFO15226 690 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHD2-226ENST00000636881 AMPD3Q01432 767 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 ENOX2Q16206 610 aaKnown RBP9.37□□□□□ -0.91
CHD2-226ENST00000636881 NBPF9Q3BBW0 867 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.37□□□□□ -0.919e-7■■■■■ 57.1
CHD2-226ENST00000636881 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.911e-6■■□□□ 14.2
CHD2-226ENST00000636881 CUEDC2Q9H467 287 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 TNS3Q68CZ2 1445 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 XRCC4Q13426 336 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 CUL1Q13616 776 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 KRT71Q3SY84 523 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 AGBL2Q5U5Z8 902 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 NLRP10Q86W26 655 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 HPS3Q969F9 1004 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 TRIM9Q9C026 710 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 MAGEF1Q9HAY2 307 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 SLC12A6Q9UHW9 1150 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 FAM205AQ6ZU69 1335 aa9.37□□□□□ -0.91
CHD2-226ENST00000636881 PHF20L1A8MW92 1017 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 KCNK3O14649 394 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 PDE8AO60658 829 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 VEGFAP15692 232 aaPredicted RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 FGFR2P21802 821 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ERVK-9P63128 1117 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ZNF844Q08AG5 666 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 INF2Q27J81 1249 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 LACTB2Q53H82 288 aaPredicted RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 SFMBT2Q5VUG0 894 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms