RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 NEK3P51956 506 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SMUG1Q53HV7 270 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 KRT27Q7Z3Y8 459 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC25Q86WR0 208 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 STX12Q86Y82 276 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CCAR2Q8N163 923 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 C7orf57Q8NEG2 295 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 TRIM58Q8NG06 486 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SLC22A8Q8TCC7 542 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CACTINQ8WUQ7 758 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ABTB1Q969K4 478 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 UTP14AQ9BVJ6 771 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ARNT2Q9HBZ2 717 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 INPP5FQ9Y2H2 1132 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PIK3R4Q99570 1358 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PZPP20742 1482 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CLTCQ00610 1675 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 E2F3O00716 465 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 SOCS7O14512 581 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CYTH3O43739 400 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 AHCYL1O43865 530 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 GUCY1B2O75343 617 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 SKAP2O75563 359 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 TCEA3O75764 348 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 RASGRP1O95267 797 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 MTHFD1P11586 935 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 S100A1P23297 94 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 GBP1P32455 592 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 SLC8A3P57103 927 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 INHBEP58166 350 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 NAA30Q147X3 362 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ZSCAN25Q6NSZ9 544 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CFAP161Q6P656 301 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 KIF6Q6ZMV9 814 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 FCHSD1Q86WN1 690 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PIP4K2CQ8TBX8 421 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 UTP15Q8TED0 518 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ABHD8Q96I13 439 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CATSPER2Q96P56 530 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PARVGQ9HBI0 331 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PARP2Q9UGN5 583 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 NSFL1CQ9UNZ2 370 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CEP152O94986 1710 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 EBAG9O00559 213 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ZSCAN12O43309 604 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 FGAP02671 866 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 IFIT1P09914 478 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 SKIP12755 728 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 EIF2S2P20042 333 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CASTP20810 708 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CDC25CP30307 473 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 TUBA4AP68366 448 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 MRPS15P82914 257 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 KLC1Q07866 573 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 DIXDC1Q155Q3 683 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PROSER3Q2NL68 480 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 MAJINQ3KP22 176 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ARHGAP29Q52LW3 1261 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 WDR44Q5JSH3 913 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CRTC1Q6UUV9 634 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 COLGALT2Q8IYK4 626 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ST13P4Q8IZP2 240 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 LINC00469Q8N7U9 141 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CEP112Q8N8E3 955 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 NRBF2Q96F24 287 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 HERC2P3Q9BVR0 1158 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 GLT8D2Q9H1C3 349 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 C8orf4Q9NR00 106 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ZNF148Q9UQR1 794 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ZDHHC9Q9Y397 364 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 QRICH2Q9H0J4 1663 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 GPATCH8Q9UKJ3 1502 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 COL22A1Q8NFW1 1626 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 GNAT3A8MTJ3 354 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CHL1O00533 1208 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ZW10O43264 779 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 TSC22D2O75157 780 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 NFKBIAP25963 317 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CDC25BP30305 580 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ROR2Q01974 943 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 RALGDSQ12967 914 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PICALMQ13492 652 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ITGA7Q13683 1181 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PKN1Q16512 942 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ZBTB41Q5SVQ8 909 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PPP4R3AQ6IN85 833 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CCBE1Q6UXH8 406 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC155Q8N6L0 562 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 EPS8L3Q8TE67 593 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 RAPGEF5Q92565 580 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 MAML1Q92585 1016 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 DACT3Q96B18 629 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 RBM41Q96IZ5 413 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 TEX13BQ9BXU2 312 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 VCX3AQ9NNX9 186 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 A1CFQ9NQ94 594 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 SNRKQ9NRH2 765 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 LUZP4Q9P127 313 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 IQGAP1P46940 1657 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms