RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ASNSP08243 561 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 EXOSC10Q01780 885 aaKnown RBP13.04□□□□□ -0.32
LINC00538-201ENST00000626109 ELOAQ14241 798 aaKnown RBP13.04□□□□□ -0.32
LINC00538-201ENST00000626109 RRP1BQ14684 758 aaKnown RBP13.04□□□□□ -0.32
LINC00538-201ENST00000626109 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 CYB5R4Q7L1T6 521 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 SCYL3Q8IZE3 742 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 RELTQ969Z4 430 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 AGXT2Q9BYV1 514 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 C12orf49Q9H741 205 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 PICK1Q9NRD5 415 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 PASKQ96RG2 1323 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 ERICH2A1L162 156 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 IPO5O00410 1097 aaKnown RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 LZTS3O60299 673 aaPredicted RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 NOL9Q5SY16 702 aaKnown RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 CHST3Q7LGC8 479 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 ANKRD13BQ86YJ7 626 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 CKAP2LQ8IYA6 745 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 FBXL16Q8N461 479 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 NKX2-3Q8TAU0 364 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 CDHR1Q96JP9 859 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 TAGLN3Q9UI15 199 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 DTNBO60941 627 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 CDKN1CP49918 316 aaPredicted RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 ANTXR2P58335 489 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 SATB1Q01826 763 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 TAF11Q15544 211 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 DNAJC21Q5F1R6 531 aaKnown RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 MOB2Q70IA6 237 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 NSUN7Q8NE18 718 aaKnown RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 KIAA1524Q8TCG1 905 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 ZKSCAN4Q969J2 545 aaPredicted RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 TMEM87BQ96K49 555 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
LINC00538-201ENST00000626109 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 CBX8Q9HC52 389 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 RCOR1Q9UKL0 485 aa13.03□□□□□ -0.32
LINC00538-201ENST00000626109 A0A1W2PRQ8 180 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 NR1I2O75469 434 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 AP1G2O75843 785 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 ZNF165P49910 485 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 ICA1Q05084 483 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.32
LINC00538-201ENST00000626109 VGLL4Q14135 290 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 NFE2Q16621 373 aaPredicted RBP13.02□□□□□ -0.32
LINC00538-201ENST00000626109 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.32
LINC00538-201ENST00000626109 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 ACBD5Q5T8D3 534 aaPredicted RBP13.02□□□□□ -0.32
LINC00538-201ENST00000626109 MFSD4BQ5TF39 518 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 CCDC73Q6ZRK6 1079 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.32
LINC00538-201ENST00000626109 LUZP1Q86V48 1076 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 LCA5Q86VQ0 697 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 SPC24Q8NBT2 197 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 CEP95Q96GE4 821 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 PGBD1Q96JS3 809 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 TRIM5Q9C035 493 aa13.02□□□□□ -0.32
LINC00538-201ENST00000626109 TNKSO95271 1327 aa13.02□□□□□ -0.33
LINC00538-201ENST00000626109 DOCK1Q14185 1865 aa13.02□□□□□ -0.33
LINC00538-201ENST00000626109 TRPM7Q96QT4 1865 aa13.02□□□□□ -0.33
LINC00538-201ENST00000626109 IGKV6D-41A0A0C4DH26 115 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 NMT2O60551 498 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
LINC00538-201ENST00000626109 JAG1P78504 1218 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 CST9Q5W186 159 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 JAMLQ86YT9 394 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 IL17RBQ9NRM6 502 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 SPDYE16A6NNV3 312 aaPredicted RBP13.01□□□□□ -0.33
LINC00538-201ENST00000626109 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 RPN1P04843 607 aaKnown RBP13.01□□□□□ -0.33
LINC00538-201ENST00000626109 GUCY1A2P33402 732 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 APOBRQ0VD83 1088 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 IFT88Q13099 833 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 WTAPQ15007 396 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 BRDTQ58F21 947 aaPredicted RBP13.01□□□□□ -0.33
LINC00538-201ENST00000626109 DGKHQ86XP1 1220 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 ITFG2Q969R8 447 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 FANCLQ9NW38 375 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 MTMR4Q9NYA4 1195 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 SNCAIPQ9Y6H5 919 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 GREB1LQ9C091 1923 aaPredicted RBP13.01□□□□□ -0.33
LINC00538-201ENST00000626109 OTOFQ9HC10 1997 aa13.01□□□□□ -0.33
LINC00538-201ENST00000626109 ATAD5Q96QE3 1844 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 hCG_1984214I3L0E3 225 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 513.1 ms