RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MAGEC2Q9UBF1 373 aaPredicted RBP22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 TMX2Q9Y320 296 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 KDM3AQ9Y4C1 1321 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 LGALS16A8MUM7 142 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 FOSP01100 380 aaPredicted RBP22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 HOXA7P31268 230 aaPredicted RBP22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 ARHGAP4P98171 946 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 ECM1Q16610 540 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 USH1GQ495M9 461 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 ANKRD40Q6AI12 368 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 NIM1KQ8IY84 436 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 GJA10Q969M2 543 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 P2RX7Q99572 595 aaKnown RBP22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 PRR12Q9ULL5 1215 aa22.04■■□□□ 1.12
PCDHB11-202ENST00000624887 PHLPP2Q6ZVD8 1323 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 SLC26A4O43511 780 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 ECE1P42892 770 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 UBXN1Q04323 297 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 SLFN12Q8IYM2 578 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 SPICE1Q8N0Z3 855 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 NT5C3AQ9H0P0 336 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 ZBTB21Q9ULJ3 1066 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 TBC1D12O60347 775 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 ZNF507Q8TCN5 953 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 L2HGDHQ9H9P8 463 aa22.03■■□□□ 1.12
PCDHB11-202ENST00000624887 A0A1W2PQC6 194 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 STAT2P52630 851 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 CENPPQ6IPU0 288 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 DYMQ7RTS9 669 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 FAM83AQ86UY5 434 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 MB21D1Q8N884 522 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 ACER1Q8TDN7 264 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 DDX12PQ92771 950 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 HPS3Q969F9 1004 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 VEZTQ9HBM0 779 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 GOPCQ9HD26 462 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 SLC39A2Q9NP94 309 aa22.02■■□□□ 1.12
PCDHB11-202ENST00000624887 SOWAHDA6NJG2 315 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 SPDYE3A6NKU9 549 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 OPLAHO14841 1288 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 SREBF1P36956 1147 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 EHHADHQ08426 723 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 Q4G0T1 1027 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 FAM114A1Q8IWE2 563 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 ANKRD7Q92527 254 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 BRCA1P38398 1863 aaKnown RBP22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 TBX3O15119 743 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 TRAF1Q13077 416 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 PSMD2Q13200 908 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 MTF1Q14872 753 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 KIAA1755Q5JYT7 1200 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 RAD9BQ6WBX8 426 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 TEX2Q8IWB9 1127 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 ETNPPLQ8TBG4 499 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 ABHD10Q9NUJ1 306 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 DNAI1Q9UI46 699 aa22.01■■□□□ 1.11
PCDHB11-202ENST00000624887 PIK3CDO00329 1044 aa22■■□□□ 1.11
PCDHB11-202ENST00000624887 NCBP1Q09161 790 aaKnown RBP22■■□□□ 1.11
PCDHB11-202ENST00000624887 GUF1Q8N442 669 aaKnown RBP22■■□□□ 1.11
PCDHB11-202ENST00000624887 ZBED3Q96IU2 234 aaPredicted RBP22■■□□□ 1.11
PCDHB11-202ENST00000624887 TUBGCP2Q9BSJ2 902 aa22■■□□□ 1.11
PCDHB11-202ENST00000624887 TMEM39BQ9GZU3 492 aa22■■□□□ 1.11
PCDHB11-202ENST00000624887 TAOK3Q9H2K8 898 aa22■■□□□ 1.11
PCDHB11-202ENST00000624887 SEMA6BQ9H3T3 888 aa22■■□□□ 1.11
PCDHB11-202ENST00000624887 CCDC175P0C221 793 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 DNM2P50570 870 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 CXCL9Q07325 125 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 DESI2Q9BSY9 194 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 RNF225M0QZC1 329 aaPredicted RBP21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 IDEP14735 1019 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 CIITAP33076 1130 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 PRR16Q569H4 304 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 TMTC1Q8IUR5 882 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 LENG9Q96B70 501 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 DNAJC19Q96DA6 116 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 CNOT6LQ96LI5 555 aaKnown RBP21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 ZNF215Q9UL58 517 aaPredicted RBP21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 ADGRG1Q9Y653 693 aa21.99■■□□□ 1.11
PCDHB11-202ENST00000624887 SLU7O95391 586 aaKnown RBP21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 FAM83BQ5T0W9 1011 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 CDAN1Q8IWY9 1227 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 PGAP2Q9UHJ9 254 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 KIAA1024Q9UPX6 916 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 BCS1LQ9Y276 419 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 TAL1P17542 331 aaPredicted RBP21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 SPIRE1Q08AE8 756 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 ERO1AQ96HE7 468 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 VCPKMTQ9H867 229 aa21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 BMP2KQ9NSY1 1161 aaPredicted RBP21.98■■□□□ 1.11
PCDHB11-202ENST00000624887 FAM86B1E9PN63 330 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 CYP3A4P08684 503 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 FAM86B2P0C5J1 330 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 KRT9P35527 623 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 CAP2P40123 477 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 MAP3K10Q02779 954 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 HAUS3Q68CZ6 603 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 FOXR2Q6PJQ5 311 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 CHURC1Q8WUH1 139 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 FAM20AQ96MK3 541 aa21.97■■□□□ 1.11
PCDHB11-202ENST00000624887 UIMC1Q96RL1 719 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms