RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PGM5Q15124 567 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 TMEM240Q5SV17 173 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 CMTR1Q8N1G2 835 aaKnown RBP19.87■□□□□ 0.77
HMGN3-203ENST00000620514 SRBD1Q8N5C6 995 aaKnown RBP19.87■□□□□ 0.77
HMGN3-203ENST00000620514 SAMD3Q8N6K7 520 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 CCDC136Q96JN2 1154 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 KPNA6O60684 536 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 CYP2C9P11712 490 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 KIF5BP33176 963 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 LIFRP42702 1097 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 FAM47CQ5HY64 1035 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 ZNF365Q70YC5 407 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 VSIG10LQ86VR7 867 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 TMTC2Q8N394 836 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 GUCD1Q96NT3 240 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 WNT8AQ9H1J5 351 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 MRVI1Q9Y6F6 885 aa19.86■□□□□ 0.77
HMGN3-203ENST00000620514 SORBS3O60504 671 aa19.85■□□□□ 0.77
HMGN3-203ENST00000620514 CHMP4BP1P59074 171 aa19.85■□□□□ 0.77
HMGN3-203ENST00000620514 ZNF697Q5TEC3 545 aa19.85■□□□□ 0.77
HMGN3-203ENST00000620514 RASEFQ8IZ41 740 aa19.85■□□□□ 0.77
HMGN3-203ENST00000620514 RRP36Q96EU6 259 aaKnown RBP19.85■□□□□ 0.77
HMGN3-203ENST00000620514 TCEANC2Q96MN5 208 aa19.85■□□□□ 0.77
HMGN3-203ENST00000620514 IL23AQ9NPF7 189 aa19.85■□□□□ 0.77
HMGN3-203ENST00000620514 LAMA2P24043 3122 aaKnown RBP19.85■□□□□ 0.77
HMGN3-203ENST00000620514 SMARCA1P28370 1054 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 ADCK5Q3MIX3 580 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 RNF20Q5VTR2 975 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 NFRKBQ6P4R8 1299 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 KAT2BQ92831 832 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 GPKOWQ92917 476 aaPredicted RBP eCLIP19.84■□□□□ 0.77
HMGN3-203ENST00000620514 SCLYQ96I15 445 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 LZTS2Q9BRK4 669 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 TTYH1Q9H313 450 aaPredicted RBP19.84■□□□□ 0.77
HMGN3-203ENST00000620514 STXBP5LQ9Y2K9 1186 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 SLC12A7Q9Y666 1083 aa19.84■□□□□ 0.77
HMGN3-203ENST00000620514 hCG_1642624A0A1W2PR95 340 aa19.83■□□□□ 0.77
HMGN3-203ENST00000620514 SUPT20HL2P0C7V6 817 aa19.83■□□□□ 0.77
HMGN3-203ENST00000620514 CCND2P30279 289 aa19.83■□□□□ 0.77
HMGN3-203ENST00000620514 GNAQP50148 359 aa19.83■□□□□ 0.77
HMGN3-203ENST00000620514 RASIP1Q5U651 963 aa19.83■□□□□ 0.77
HMGN3-203ENST00000620514 DHX37Q8IY37 1157 aaKnown RBP19.83■□□□□ 0.77
HMGN3-203ENST00000620514 NEK1Q96PY6 1258 aa19.83■□□□□ 0.77
HMGN3-203ENST00000620514 SEMA6BQ9H3T3 888 aa19.83■□□□□ 0.77
HMGN3-203ENST00000620514 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.82■□□□□ 0.76
HMGN3-203ENST00000620514 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.82■□□□□ 0.76
HMGN3-203ENST00000620514 GRXCR1A8MXD5 290 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 CALM1P0DP23 149 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 CALM2P0DP24 149 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 CALM3P0DP25 149 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 EXOSC10Q01780 885 aaKnown RBP19.82■□□□□ 0.76
HMGN3-203ENST00000620514 SP2Q02086 613 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 PSRC1Q6PGN9 363 aaPredicted RBP19.82■□□□□ 0.76
HMGN3-203ENST00000620514 USP17L6PQ6QN14 398 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 SGMS1Q86VZ5 419 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 MICU3Q86XE3 530 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 CCDC82Q8N4S0 544 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 FANCBQ8NB91 859 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 EMID1Q96A84 441 aaPredicted RBP19.82■□□□□ 0.76
HMGN3-203ENST00000620514 VWCEQ96DN2 955 aa19.82■□□□□ 0.76
HMGN3-203ENST00000620514 SEC63Q9UGP8 760 aaKnown RBP19.82■□□□□ 0.76
HMGN3-203ENST00000620514 FRMPD4Q14CM0 1322 aa19.81■□□□□ 0.76
HMGN3-203ENST00000620514 CASTP20810 708 aaKnown RBP19.81■□□□□ 0.76
HMGN3-203ENST00000620514 MRPS9P82933 396 aaKnown RBP19.81■□□□□ 0.76
HMGN3-203ENST00000620514 PTPN11Q06124 597 aaPredicted RBP19.81■□□□□ 0.76
HMGN3-203ENST00000620514 LAMC2Q13753 1193 aa19.81■□□□□ 0.76
HMGN3-203ENST00000620514 DGKDQ16760 1214 aa19.81■□□□□ 0.76
HMGN3-203ENST00000620514 TMTC3Q6ZXV5 915 aa19.81■□□□□ 0.76
HMGN3-203ENST00000620514 PPTC7Q8NI37 304 aa19.81■□□□□ 0.76
HMGN3-203ENST00000620514 CXXC1Q9P0U4 656 aaPredicted RBP19.81■□□□□ 0.76
HMGN3-203ENST00000620514 MEIS2O14770 477 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 GGPS1O95749 300 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 FGBP02675 491 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 ZNF286BP0CG31 522 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 UBA1P22314 1058 aaKnown RBP19.8■□□□□ 0.76
HMGN3-203ENST00000620514 TSGA10IPQ3SY00 556 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 CELF3Q5SZQ8 465 aaKnown RBP19.8■□□□□ 0.76
HMGN3-203ENST00000620514 MYSM1Q5VVJ2 828 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 KCNV1Q6PIU1 500 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 DHX32Q7L7V1 743 aaKnown RBP19.8■□□□□ 0.76
HMGN3-203ENST00000620514 OTOP2Q7RTS6 562 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 SMARCC2Q8TAQ2 1214 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 HERVK_113Q902F9 699 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 BCAS3Q9H6U6 928 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 BRPF3Q9ULD4 1205 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 MYH7BA7E2Y1 1941 aa19.8■□□□□ 0.76
HMGN3-203ENST00000620514 DNAJB2P25686 324 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 PBX2P40425 430 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 PSEN2P49810 448 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 HSDL1Q3SXM5 330 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 GDF6Q6KF10 455 aaPredicted RBP19.79■□□□□ 0.76
HMGN3-203ENST00000620514 APOA5Q6Q788 366 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 CUL5Q93034 780 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 SPATA33Q96N06 139 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 CTAGE1Q96RT6 745 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 CDX2Q99626 313 aaPredicted RBP19.79■□□□□ 0.76
HMGN3-203ENST00000620514 ALG1Q9BT22 464 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 RTEL1Q9NZ71 1219 aa19.79■□□□□ 0.76
HMGN3-203ENST00000620514 PIK3CDO00329 1044 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 CPA1P15085 419 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms