RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MMEP08473 750 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 RWDD2BP57060 319 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 SESN3P58005 492 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 LACTBP83111 547 aaPredicted RBP10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 MAP3K12Q12852 859 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 RAPGEF1Q13905 1077 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 KIF6Q6ZMV9 814 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 SPICE1Q8N0Z3 855 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 MTMR8Q96EF0 704 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 FAM89AQ96GI7 184 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 NACAP1Q9BZK3 213 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 LUC7LQ9NQ29 371 aaKnown RBP10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 ETAA1Q9NY74 926 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 ABCF2Q9UG63 623 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 C15orf41Q9Y2V0 281 aa10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 THRAP3Q9Y2W1 955 aaKnown RBP10.74□□□□□ -0.69
TNFAIP3-210ENST00000620204 CCT8L1PA6NM43 557 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 SNUPNO95149 360 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 NEFHP12036 1026 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 IFIT5Q13325 482 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 HLFQ16534 295 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 SLC30A9Q6PML9 568 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 WHAMMQ8TF30 809 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 TAF1DQ9H5J8 278 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.73□□□□□ -0.699e-7■■■□□ 15.3
TNFAIP3-210ENST00000620204 SWAP70Q9UH65 585 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 KDM6AO15550 1401 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 LRRC53A6NM62 1247 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 FOXP2O15409 715 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 DAPK3O43293 454 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 STARD3NLO95772 234 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 ATP11AP98196 1134 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 LRRC14Q15048 493 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 PDIA6Q15084 440 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 SMIM5Q71RC9 77 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 CCDC25Q86WR0 208 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 CAVIN3Q969G5 261 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 CHMP6Q96FZ7 201 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 OSBPL1AQ9BXW6 950 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 SLC39A2Q9NP94 309 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 TRAPPC3O43617 180 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 EEF1GP26641 437 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 RPS6KA1Q15418 735 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 DAAM2Q86T65 1068 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 SLC17A8Q8NDX2 589 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 TLR10Q9BXR5 811 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 ZHX3Q9H4I2 956 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 TMBIM4Q9HC24 238 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 KCNK9Q9NPC2 374 aa10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 INTS9Q9NV88 658 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 CNOT8Q9UFF9 292 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-210ENST00000620204 LRRC10BA6NIK2 292 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 KCNJ2P63252 427 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 CCDC38Q502W7 563 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 RCSD1Q6JBY9 416 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 ANKRD42Q8N9B4 389 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 PAIP2Q9BPZ3 127 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 ARHGAP20Q9P2F6 1191 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 KRIT1O00522 736 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 RBM5P52756 815 aaKnown RBP eCLIP10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 SLC8A3P57103 927 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 DYMQ7RTS9 669 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 LONP2Q86WA8 852 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 IRF2BP1Q8IU81 584 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 FAM114A1Q8IWE2 563 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 CCDC155Q8N6L0 562 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 CCDC26Q8TAB7 109 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 BATF3Q9NR55 127 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 AMACRQ9UHK6 382 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 SALL4Q9UJQ4 1053 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 TUBGCP6Q96RT7 1819 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 CPDO75976 1380 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 A8MUI8 341 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 KCNQ2O43526 872 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 ADCY2Q08462 1091 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 AKNAD1Q5T1N1 836 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 IFNL3Q8IZI9 196 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 SPATA20Q8TB22 786 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 TBC1D5Q92609 795 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 KRT23Q9C075 422 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 USP21Q9UK80 565 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 SLIT3O75094 1523 aa10.72□□□□□ -0.69
TNFAIP3-210ENST00000620204 LRRD1A4D1F6 860 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 SNAP23O00161 211 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 HIP1RO75146 1068 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 RTN2O75298 545 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 PLEKHA8P1O95397 391 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 GNAT1P11488 350 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 CTCFP49711 727 aaPredicted RBP10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 OTUD6AQ7L8S5 288 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 CATIPQ7Z7H3 387 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 LRP2BPQ9P2M1 347 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 IGF2BP3O00425 579 aaKnown RBP eCLIP10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 ABCC6O95255 1503 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms