RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 SOBPA7XYQ1 873 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 H3BNC9 293 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 ADORA1P30542 326 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 ICAM3P32942 547 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 RFC2P35250 354 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 RRP1P56182 461 aaKnown RBP8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 NKX3-2P78367 333 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 KIAA0319Q5VV43 1072 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 ANKRD44Q8N8A2 993 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 CYP2W1Q8TAV3 490 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 TSR2Q969E8 191 aaKnown RBP8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 MSLNLQ96KJ4 702 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 GINM1Q9NU53 330 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 COL11A1P12107 1806 aaPredicted RBP8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 ATG2AQ2TAZ0 1938 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 ZNFX1Q9P2E3 1918 aaKnown RBP8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 TANC1Q9C0D5 1861 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 FLT1P17948 1338 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 BPTFQ12830 3046 aa8.49□□□□□ -1.05
SCAMP1-206ENST00000618166 A0A1B0GUL7 405 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 NBPF7P0C2Y1 421 aaPredicted RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 GNAI1P63096 354 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 SH3BP2P78314 561 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 ANGPT1Q15389 498 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 FSCN1Q16658 493 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 MAMDC4Q6UXC1 1216 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 TGFBRAP1Q8WUH2 860 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 FGD4Q96M96 766 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 KATNBL1Q9H079 304 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 DHX36Q9H2U1 1008 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 GNL3LQ9NVN8 582 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 C9orf78Q9NZ63 289 aaPredicted RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 CLEC1BQ9P126 229 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 DDX49Q9Y6V7 483 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 PI15O43692 258 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 CABYRO75952 493 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 FLOT1O75955 427 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 EYA4O95677 639 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 SP100P23497 879 aaPredicted RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 PI16Q6UXB8 463 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.057e-18■■■■■ 58.6
SCAMP1-206ENST00000618166 TBC1D9Q6ZT07 1266 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 NOL8Q76FK4 1167 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 TLK2Q86UE8 772 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 FOXP4Q8IVH2 680 aaPredicted RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 MB21D1Q8N884 522 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 NSUN4Q96CB9 384 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 PURBQ96QR8 312 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 SIL1Q9H173 461 aa8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 USP15Q9Y4E8 981 aaPredicted RBP8.48□□□□□ -1.05
SCAMP1-206ENST00000618166 BRD1O95696 1058 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 SLC25A27O95847 323 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 NDUFV1P49821 464 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 USP46P62068 366 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 ADAM15Q13444 863 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 ATP2B3Q16720 1220 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 RABL6Q3YEC7 729 aaPredicted RBP8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 CCDC102BQ68D86 513 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 CWF19L1Q69YN2 538 aaKnown RBP8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 TATDN1Q6P1N9 297 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 ATG9AQ7Z3C6 839 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 ZBTB33Q86T24 672 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 RIOX2Q8IUF8 465 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 SPICE1Q8N0Z3 855 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 MSL3Q8N5Y2 521 aaKnown RBP8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 SMRP1Q8NCR6 262 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 RUNDC1Q96C34 613 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 GNEQ9Y223 722 aaKnown RBP8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 WDFY3Q8IZQ1 3526 aa8.47□□□□□ -1.05
SCAMP1-206ENST00000618166 OTOGLQ3ZCN5 2332 aa8.46□□□□□ -1.05
SCAMP1-206ENST00000618166 LOC400499M0QZD8 3231 aa8.46□□□□□ -1.05
SCAMP1-206ENST00000618166 MYO7AQ13402 2215 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 DNAJC25-GNG10A0A024R161 153 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 RNF225M0QZC1 329 aaPredicted RBP8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 GRM6O15303 877 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 DYNC1LI2O43237 492 aaPredicted RBP8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 NBNO60934 754 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 SUPT20HL2P0C7V6 817 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 TNFAIP2Q03169 654 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 DMWDQ09019 674 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 SEPT2Q15019 361 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 ABCB5Q2M3G0 1257 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 FAM47CQ5HY64 1035 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 ARMCX2Q7L311 632 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 TMEM192Q8IY95 271 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 KREMEN2Q8NCW0 462 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 RUBCNQ92622 972 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 PHF7Q9BWX1 381 aaPredicted RBP8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 ABHD16BQ9H3Z7 469 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 FBXO28Q9NVF7 368 aa8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 AATFQ9NY61 560 aaKnown RBP eCLIP8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 BARX2Q9UMQ3 279 aaPredicted RBP8.46□□□□□ -1.06
SCAMP1-206ENST00000618166 E9PSI1 815 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms