RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 FAM204AQ9H8W3 233 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 RNF40O75150 1001 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 SYF2O95926 243 aaKnown RBP13.1□□□□□ -0.31
C11orf54-215ENST00000617482 MATR3P43243 847 aaKnown RBP eCLIP13.1□□□□□ -0.31
C11orf54-215ENST00000617482 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
C11orf54-215ENST00000617482 ECM1Q16610 540 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 MAN2A1Q16706 1144 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 UBE2SQ16763 222 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 LEKR1Q6ZMV7 388 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 RAD54LQ92698 747 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 TSGA10Q9BZW7 698 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 MED4Q9NPJ6 270 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 STK17AQ9UEE5 414 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 SNX12Q9UMY4 172 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 JRKLQ9Y4A0 524 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 TULP2O00295 520 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 TACC1O75410 805 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 PLCG2P16885 1265 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 SMARCA1P28370 1054 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 EZH2Q15910 746 aaKnown RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 KRT79Q5XKE5 535 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 CCNI2Q6ZMN8 369 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 CREG2Q8IUH2 290 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 TRIM58Q8NG06 486 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 SMARCAL1Q9NZC9 954 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 GGA1Q9UJY5 639 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 TNRC6CQ9HCJ0 1690 aaKnown RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 HNRNPH3P31942 346 aaKnown RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 CCDC84Q86UT8 332 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
C11orf54-215ENST00000617482 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
C11orf54-215ENST00000617482 MARCH6O60337 910 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 SSBP05455 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
C11orf54-215ENST00000617482 AKR1B1P15121 316 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-215ENST00000617482 PDIA5Q14554 519 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 NFRKBQ6P4R8 1299 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 FOXR1Q6PIV2 292 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-215ENST00000617482 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 SELENOOQ9BVL4 669 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 RAB34Q9BZG1 259 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 VIPAS39Q9H9C1 493 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 EHD2Q9NZN4 543 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 NCK2O43639 380 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
C11orf54-215ENST00000617482 IL1R1P14778 569 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 SLC16A2P36021 539 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 GGCXP38435 758 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 MAGEA1P43355 309 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 SLC7A5Q01650 507 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 RASSF7Q02833 373 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 LRRC55Q6ZSA7 311 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-215ENST00000617482 CACNA2D4Q7Z3S7 1137 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 CNPY4Q8N129 248 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 LRRC1Q9BTT6 524 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 NLRC4Q9NPP4 1024 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.32
C11orf54-215ENST00000617482 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
C11orf54-215ENST00000617482 BTAF1O14981 1849 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 LRRC63Q05C16 580 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 ORC2Q13416 577 aaPredicted RBP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 BAP1Q92560 729 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 CRACR2AQ9BSW2 395 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 KANSL2Q9H9L4 492 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 DDX25Q9UHL0 483 aaKnown RBP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 TRAF5O00463 557 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 BUB1O43683 1085 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 PPP1R11O60927 126 aaPredicted RBP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 NOVP48745 357 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 NAP1L1P55209 391 aaKnown RBP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 GTF2IP78347 998 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 IQCEQ6IPM2 695 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 MYOCDQ8IZQ8 938 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms