RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 CAPN7Q9Y6W3 813 aa16.81■□□□□ 0.28
TNXB-209ENST00000613214 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
TNXB-209ENST00000613214 HPS4Q9NQG7 708 aa16.81■□□□□ 0.28
TNXB-209ENST00000613214 KCNA1Q09470 495 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 AFF4Q9UHB7 1163 aaKnown RBP16.8■□□□□ 0.28
TNXB-209ENST00000613214 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 RPSAP08865 295 aaKnown RBP16.8■□□□□ 0.28
TNXB-209ENST00000613214 PI4K2BG5E9Z4 385 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 CPP00450 1065 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 CACNB2Q08289 660 aaPredicted RBP16.8■□□□□ 0.28
TNXB-209ENST00000613214 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 RETREG2Q8NC44 543 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 GRK7Q8WTQ7 553 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 CCND2P30279 289 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 LLPHQ9BRT6 129 aaKnown RBP16.8■□□□□ 0.28
TNXB-209ENST00000613214 SYCP2Q9BX26 1530 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 GNA14O95837 355 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 KRT1P04264 644 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 MAPK4P31152 587 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 MRPS25P82663 173 aaKnown RBP16.8■□□□□ 0.28
TNXB-209ENST00000613214 MAIP1Q8WWC4 291 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 YIPF2Q9BWQ6 316 aa16.8■□□□□ 0.28
TNXB-209ENST00000613214 NCF2P19878 526 aaPredicted RBP16.79■□□□□ 0.28
TNXB-209ENST00000613214 CCDC157Q569K6 752 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 GUCY2DQ02846 1103 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 ZNF449Q6P9G9 518 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 LRRC8CQ8TDW0 803 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 EXOC3L4Q17RC7 722 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 SPOPLQ6IQ16 392 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 SCN4BQ8IWT1 228 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 RNF139Q8WU17 664 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 LRRC4Q9HBW1 653 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 UBE2TQ9NPD8 197 aaPredicted RBP16.79■□□□□ 0.28
TNXB-209ENST00000613214 KLHL14Q9P2G3 628 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 GFPT2O94808 682 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 SCG2P13521 617 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 RXRBP28702 533 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 HADHAP40939 763 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 ACCSLQ4AC99 568 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 SLC10A4Q96EP9 437 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 NEMP1O14524 444 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 PPFIA4O75335 1185 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 C2orf54Q08AI8 447 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 MTMR3Q13615 1198 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 DEPDC1BQ8WUY9 529 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 SGSM2O43147 1006 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 NDUFA8P51970 172 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 TBCCQ15814 346 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 NR1H4Q96RI1 486 aaPredicted RBP16.79■□□□□ 0.28
TNXB-209ENST00000613214 GDAQ9Y2T3 454 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
TNXB-209ENST00000613214 PTK2Q05397 1052 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 FANCBQ8NB91 859 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 INTS4Q96HW7 963 aaKnown RBP16.78■□□□□ 0.28
TNXB-209ENST00000613214 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
TNXB-209ENST00000613214 PMLP29590 882 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.78■□□□□ 0.28
TNXB-209ENST00000613214 FANCLQ9NW38 375 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 SLC12A6Q9UHW9 1150 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 ARHGAP6O43182 974 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 TTC4O95801 387 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 MYL1P05976 194 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 PEX19P40855 299 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 PPFIA2O75334 1257 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 CTTNQ14247 550 aaKnown RBP16.78■□□□□ 0.28
TNXB-209ENST00000613214 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 CNOT6LQ96LI5 555 aaKnown RBP16.78■□□□□ 0.28
TNXB-209ENST00000613214 C21orf2O43822 256 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 ATP6V1E1P36543 226 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 VCPP55072 806 aaKnown RBP16.78■□□□□ 0.28
TNXB-209ENST00000613214 PASD1Q8IV76 773 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 SIX6OS1Q8N1H7 587 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 TTC25Q96NG3 672 aa16.78■□□□□ 0.28
TNXB-209ENST00000613214 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
TNXB-209ENST00000613214 PRKAB2O43741 272 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 ARHGEF18Q6ZSZ5 1173 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.77■□□□□ 0.28
TNXB-209ENST00000613214 PIP4K2CQ8TBX8 421 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 CNKSR1Q969H4 720 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 PIGSQ96S52 555 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 VCX3AQ9NNX9 186 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 SART1O43290 800 aaKnown RBP16.77■□□□□ 0.28
TNXB-209ENST00000613214 EEF1B2P24534 225 aaKnown RBP16.77■□□□□ 0.28
TNXB-209ENST00000613214 SLC7A3Q8WY07 619 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 CDKL2Q92772 493 aa16.77■□□□□ 0.28
TNXB-209ENST00000613214 USP17L8P0C7I0 530 aa16.77■□□□□ 0.27
TNXB-209ENST00000613214 CCNA1P78396 465 aa16.77■□□□□ 0.27
TNXB-209ENST00000613214 ATL3Q6DD88 541 aa16.77■□□□□ 0.27
TNXB-209ENST00000613214 BBS5Q8N3I7 341 aa16.77■□□□□ 0.27
TNXB-209ENST00000613214 OR6B3Q8NGW1 331 aa16.77■□□□□ 0.27
TNXB-209ENST00000613214 AFG1LQ8WV93 481 aa16.77■□□□□ 0.27
TNXB-209ENST00000613214 PIDD1Q9HB75 910 aa16.77■□□□□ 0.27
TNXB-209ENST00000613214 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
TNXB-209ENST00000613214 MOCS3O95396 460 aa16.76■□□□□ 0.27
TNXB-209ENST00000613214 FGAP02671 866 aa16.76■□□□□ 0.27
TNXB-209ENST00000613214 STMN1P16949 149 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms