RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 NLRC4Q9NPP4 1024 aa18.75■□□□□ 0.59
TNIP1-220ENST00000610535 A0A1B0GUL6 1792 aa18.75■□□□□ 0.59
TNIP1-220ENST00000610535 ASTE1Q2TB18 679 aaPredicted RBP18.74■□□□□ 0.59
TNIP1-220ENST00000610535 ERFEQ4G0M1 354 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 CFAP58Q5T655 872 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 DGKHQ86XP1 1220 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 GPATCH11Q8N954 259 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 DAGLBQ8NCG7 672 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 GLIS3Q8NEA6 775 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 AK8Q96MA6 479 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 NOX5Q96PH1 765 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 MAGEF1Q9HAY2 307 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 MYMKA6NI61 221 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 HEXIM1O94992 359 aaKnown RBP18.74■□□□□ 0.59
TNIP1-220ENST00000610535 AMPD3Q01432 767 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 LRRC41Q15345 812 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 MAN2A1Q16706 1144 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 SBK1Q52WX2 424 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 TDRD12Q587J7 1177 aaKnown RBP18.74■□□□□ 0.59
TNIP1-220ENST00000610535 MCTP2Q6DN12 878 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 CACNA2D4Q7Z3S7 1137 aa18.74■□□□□ 0.59
TNIP1-220ENST00000610535 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
TNIP1-220ENST00000610535 PJA2O43164 708 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 FTCDO95954 541 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 TXKP42681 527 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 CFAP221Q4G0U5 840 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 TMED8Q6PL24 325 aaPredicted RBP18.73■□□□□ 0.59
TNIP1-220ENST00000610535 CCDC84Q86UT8 332 aaPredicted RBP18.73■□□□□ 0.59
TNIP1-220ENST00000610535 IFT20Q8IY31 132 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 SLC44A5Q8NCS7 719 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 C8orf37Q96NL8 207 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 PACSIN2Q9UNF0 486 aaPredicted RBP18.73■□□□□ 0.59
TNIP1-220ENST00000610535 STX8Q9UNK0 236 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 CAPN7Q9Y6W3 813 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 MNAT1P51948 309 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 HGSNATQ68CP4 663 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 FBXO33Q7Z6M2 555 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 PIK3R5Q8WYR1 880 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 TANGO6Q9C0B7 1094 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 YY1AP1Q9H869 796 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 BSDC1Q9NW68 430 aaPredicted RBP18.73■□□□□ 0.59
TNIP1-220ENST00000610535 NAPAP54920 295 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 PDXDC1Q6P996 788 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 MKNK2Q9HBH9 465 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 GDF3Q9NR23 364 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 BLOC1S4Q9NUP1 217 aa18.73■□□□□ 0.59
TNIP1-220ENST00000610535 LOC102724159A0A0B4J2E5 919 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 PALMO75781 387 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 TNFRSF8P28908 595 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 LSP1P33241 339 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 KCNMA1Q12791 1236 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 PWP2Q15269 919 aaKnown RBP18.72■□□□□ 0.59
TNIP1-220ENST00000610535 SV2BQ7L1I2 683 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 KRT12Q99456 494 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 SMCO2A6NFE2 343 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 MYO1FO00160 1098 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 PPP1R2P41236 205 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 GNAQP50148 359 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 SEC24CP53992 1094 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 GRB10Q13322 594 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 NONOQ15233 471 aaKnown RBP eCLIP18.72■□□□□ 0.59
TNIP1-220ENST00000610535 KCTD19Q17RG1 926 aaPredicted RBP18.72■□□□□ 0.59
TNIP1-220ENST00000610535 GALNT17Q6IS24 598 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 IQCDQ96DY2 449 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 CALML4Q96GE6 196 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
TNIP1-220ENST00000610535 KLRF2D3W0D1 207 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 GLE1Q53GS7 698 aaKnown RBP18.71■□□□□ 0.59
TNIP1-220ENST00000610535 C12orf60Q5U649 245 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 CASKIN2Q8WXE0 1202 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 TLR2O60603 784 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 TSPY3P0CV98 308 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 TSPY8P0CW00 308 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 ENOX2Q16206 610 aaKnown RBP18.71■□□□□ 0.59
TNIP1-220ENST00000610535 B4GALNT4Q76KP1 1039 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 OTUD6BQ8N6M0 293 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 TMEM47Q9BQJ4 181 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 ZMYND12Q9H0C1 365 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 KANSL2Q9H9L4 492 aa18.71■□□□□ 0.59
TNIP1-220ENST00000610535 BIN2Q9UBW5 565 aaPredicted RBP18.71■□□□□ 0.59
TNIP1-220ENST00000610535 LRRC55Q6ZSA7 311 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 NEK8Q86SG6 692 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 TBCKQ8TEA7 893 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 PALM3A6NDB9 673 aaPredicted RBP18.7■□□□□ 0.58
TNIP1-220ENST00000610535 KLRC1P26715 233 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 ARID5AQ03989 594 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 KDM7AQ6ZMT4 941 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 PNMA5Q96PV4 448 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 TMEM260Q9NX78 707 aa18.7■□□□□ 0.58
TNIP1-220ENST00000610535 MYH1P12882 1939 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 H0YHG0 523 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 HIBADHP31937 336 aaKnown RBP18.69■□□□□ 0.58
TNIP1-220ENST00000610535 EHHADHQ08426 723 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 PAK2Q13177 524 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 COBLL1Q53SF7 1204 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 SWT1Q5T5J6 900 aaKnown RBP18.69■□□□□ 0.58
TNIP1-220ENST00000610535 NAA35Q5VZE5 725 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 UNC13DQ70J99 1090 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms