RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 UBN1Q9NPG3 1134 aa14.19□□□□□ -0.14
USP6NL-205ENST00000609104 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
USP6NL-205ENST00000609104 KCTD6Q8NC69 237 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 EEF1DP29692 281 aaKnown RBP14.18□□□□□ -0.14
USP6NL-205ENST00000609104 GALNT17Q6IS24 598 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 PPIP5K2O43314 1243 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 SRGAP2BP0DMP2 458 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 PDIA3P30101 505 aaKnown RBP14.18□□□□□ -0.14
USP6NL-205ENST00000609104 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 ODR4Q5SWX8 454 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 A0A087WWV3 80 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 SOWAHDA6NJG2 315 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 SCNN1DP51172 638 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 TRMT10CQ7L0Y3 403 aaKnown RBP14.18□□□□□ -0.14
USP6NL-205ENST00000609104 KRT26Q7Z3Y9 468 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 MAP7D3Q8IWC1 876 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 PSMC2P35998 433 aaKnown RBP14.18□□□□□ -0.14
USP6NL-205ENST00000609104 CSADQ9Y600 493 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 TMEM259Q4ZIN3 620 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 EAPPQ56P03 285 aaPredicted RBP14.18□□□□□ -0.14
USP6NL-205ENST00000609104 RPS6KC1Q96S38 1066 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 CLIC2O15247 247 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 HOXB7P09629 217 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 PARD3BQ8TEW8 1205 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 EFHD1Q9BUP0 239 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 KIF9Q9HAQ2 790 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 SLC38A10Q9HBR0 1119 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 NR2F2P24468 414 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 NCAPG2Q86XI2 1143 aa14.18□□□□□ -0.14
USP6NL-205ENST00000609104 CCDC87Q9NVE4 849 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 AFPP02771 609 aaKnown RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 HMGB1P1B2RPK0 211 aaPredicted RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 PLS3P13797 630 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 RNASELQ05823 741 aaKnown RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 CFAP43Q8NDM7 1665 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 ATICP31939 592 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 AOC3Q16853 763 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 DARS2Q6PI48 645 aaKnown RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 MAML1Q92585 1016 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 CCDC124Q96CT7 223 aaKnown RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 MAN1B1Q9UKM7 699 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 LRRC41Q15345 812 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 KRT80Q6KB66 452 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 RTEL1Q9NZ71 1219 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 PHLPP2Q6ZVD8 1323 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 BASP1P80723 227 aaKnown RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 DOK7Q18PE1 504 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 NRBF2Q96F24 287 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 TESK2Q96S53 571 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 PCIF1Q9H4Z3 704 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 G3BP2Q9UN86 482 aaKnown RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 MCF2L2Q86YR7 1114 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 TXLNGQ9NUQ3 528 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 H0YCG3 227 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 FTCDO95954 541 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 TRIP13Q15645 432 aaPredicted RBP14.17□□□□□ -0.14
USP6NL-205ENST00000609104 CYTH2Q99418 400 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 CCPG1Q9ULG6 757 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 JRKLQ9Y4A0 524 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 NT5C1BQ96P26 610 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 ABCF3Q9NUQ8 709 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 AKT3Q9Y243 479 aa14.17□□□□□ -0.14
USP6NL-205ENST00000609104 ZNF449Q6P9G9 518 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 FAM133AQ8N9E0 248 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 CARMIL3Q8ND23 1372 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 CFLARO15519 480 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.14
USP6NL-205ENST00000609104 EIF2AQ9BY44 585 aaKnown RBP14.16□□□□□ -0.14
USP6NL-205ENST00000609104 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 GUCY2CP25092 1073 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 DNAJC10Q8IXB1 793 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 CEP19Q96LK0 163 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 GFPT2O94808 682 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 RNF217Q8TC41 542 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 AK9Q5TCS8 1911 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 PPP6R2O75170 966 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 THOC5Q13769 683 aaKnown RBP14.16□□□□□ -0.14
USP6NL-205ENST00000609104 DDAH1O94760 285 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 MT-ND3P03897 115 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 DPCR1Q3MIW9 517 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 GRAMD1CQ8IYS0 662 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 TLK1Q9UKI8 766 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 PI4K2BQ8TCG2 481 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 PBKQ96KB5 322 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 ZNF577Q9BSK1 485 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 STK32BQ9NY57 414 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 FNDC3AQ9Y2H6 1198 aaKnown RBP14.16□□□□□ -0.14
USP6NL-205ENST00000609104 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 NNTQ13423 1086 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 AP1M1Q9BXS5 423 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 NHEJ1Q9H9Q4 299 aaPredicted RBP14.16□□□□□ -0.14
USP6NL-205ENST00000609104 ANGPTL2Q9UKU9 493 aa14.16□□□□□ -0.14
USP6NL-205ENST00000609104 BPIFB4P59827 614 aa14.15□□□□□ -0.14
USP6NL-205ENST00000609104 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
USP6NL-205ENST00000609104 CPSF3Q9UKF6 684 aaKnown RBP14.15□□□□□ -0.14
USP6NL-205ENST00000609104 NOVA2Q9UNW9 492 aaKnown RBP14.15□□□□□ -0.14
USP6NL-205ENST00000609104 GOLGA8SH3BPF8 625 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms