RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 NAPBQ9H115 298 aa8.8□□□□□ -1
FARP1-239ENST00000602171 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
FARP1-239ENST00000602171 DCP1AQ9NPI6 582 aaPredicted RBP8.8□□□□□ -1
FARP1-239ENST00000602171 MCM9Q9NXL9 1143 aa8.8□□□□□ -1
FARP1-239ENST00000602171 ARPP21Q9UBL0 812 aaPredicted RBP8.8□□□□□ -1
FARP1-239ENST00000602171 CTNNA3Q9UI47 895 aa8.8□□□□□ -1
FARP1-239ENST00000602171 PPME1Q9Y570 386 aa8.8□□□□□ -1
FARP1-239ENST00000602171 COL2A1P02458 1487 aaPredicted RBP8.79□□□□□ -1
FARP1-239ENST00000602171 ATRNL1Q5VV63 1379 aa8.79□□□□□ -1
FARP1-239ENST00000602171 ADM5C9JUS6 153 aa8.79□□□□□ -1
FARP1-239ENST00000602171 SGSM2O43147 1006 aa8.79□□□□□ -1
FARP1-239ENST00000602171 REC8O95072 547 aa8.79□□□□□ -1
FARP1-239ENST00000602171 CHGBP05060 677 aa8.79□□□□□ -1
FARP1-239ENST00000602171 HSPD1P10809 573 aaKnown RBP8.79□□□□□ -1
FARP1-239ENST00000602171 FKBP1BP68106 108 aa8.79□□□□□ -1
FARP1-239ENST00000602171 HYAL2Q12891 473 aa8.79□□□□□ -1
FARP1-239ENST00000602171 SETDB1Q15047 1291 aa8.79□□□□□ -1
FARP1-239ENST00000602171 ARMC9Q7Z3E5 817 aa8.79□□□□□ -1
FARP1-239ENST00000602171 FOXP4Q8IVH2 680 aaPredicted RBP8.79□□□□□ -1
FARP1-239ENST00000602171 IFNL3Q8IZI9 196 aa8.79□□□□□ -1
FARP1-239ENST00000602171 CRACR2BQ8N4Y2 399 aaPredicted RBP8.79□□□□□ -1
FARP1-239ENST00000602171 C2orf69Q8N8R5 385 aa8.79□□□□□ -1
FARP1-239ENST00000602171 CDCA5Q96FF9 252 aa8.79□□□□□ -1
FARP1-239ENST00000602171 DSCC1Q9BVC3 393 aa8.79□□□□□ -1
FARP1-239ENST00000602171 GLIS2Q9BZE0 524 aaPredicted RBP8.79□□□□□ -1
FARP1-239ENST00000602171 TMEM39BQ9GZU3 492 aa8.79□□□□□ -1
FARP1-239ENST00000602171 DDX4Q9NQI0 724 aaKnown RBP8.79□□□□□ -1
FARP1-239ENST00000602171 HERC5Q9UII4 1024 aaKnown RBP8.79□□□□□ -1
FARP1-239ENST00000602171 MYH2Q9UKX2 1941 aa8.79□□□□□ -1
FARP1-239ENST00000602171 CNTNAP1P78357 1384 aa8.78□□□□□ -1
FARP1-239ENST00000602171 UNCXA6NJT0 531 aa8.78□□□□□ -1
FARP1-239ENST00000602171 GSG1L2A8MUP6 293 aa8.78□□□□□ -1
FARP1-239ENST00000602171 GSC2O15499 205 aa8.78□□□□□ -1
FARP1-239ENST00000602171 SMNDC1O75940 238 aaKnown RBP eCLIP8.78□□□□□ -1
FARP1-239ENST00000602171 CELF2O95319 508 aaKnown RBP8.78□□□□□ -1
FARP1-239ENST00000602171 NT5C2P49902 561 aa8.78□□□□□ -1
FARP1-239ENST00000602171 ALX1Q15699 326 aa8.78□□□□□ -1
FARP1-239ENST00000602171 SBK1Q52WX2 424 aa8.78□□□□□ -1
FARP1-239ENST00000602171 TTC39BQ5VTQ0 682 aaPredicted RBP8.78□□□□□ -1
FARP1-239ENST00000602171 CCDC129Q6ZRS4 1044 aa8.78□□□□□ -1
FARP1-239ENST00000602171 TEPSINQ96N21 525 aa8.78□□□□□ -1
FARP1-239ENST00000602171 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
FARP1-239ENST00000602171 EHD4Q9H223 541 aa8.78□□□□□ -1
FARP1-239ENST00000602171 ZNF408Q9H9D4 720 aa8.78□□□□□ -1
FARP1-239ENST00000602171 CXXC1Q9P0U4 656 aaPredicted RBP8.78□□□□□ -1
FARP1-239ENST00000602171 SERPINB13Q9UIV8 391 aa8.78□□□□□ -1
FARP1-239ENST00000602171 ZMIZ1Q9ULJ6 1067 aa8.78□□□□□ -1
FARP1-239ENST00000602171 ADAMTSL1Q8N6G6 1762 aa8.78□□□□□ -1
FARP1-239ENST00000602171 ZMYM6O95789 1325 aa8.78□□□□□ -1
FARP1-239ENST00000602171 TMEM88BA6NKF7 163 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 EPB41L2O43491 1005 aaKnown RBP8.77□□□□□ -1.01
FARP1-239ENST00000602171 PRKAB2O43741 272 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 FSTP19883 344 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 PDE4BQ07343 736 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 TRIP4Q15650 581 aaPredicted RBP8.77□□□□□ -1.01
FARP1-239ENST00000602171 IMMTQ16891 758 aaKnown RBP8.77□□□□□ -1.01
FARP1-239ENST00000602171 NBPF12Q5TAG4 269 aaPredicted RBP8.77□□□□□ -1.01
FARP1-239ENST00000602171 CTR9Q6PD62 1173 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 Q6ZS46 218 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 ZNF589Q86UQ0 364 aaPredicted RBP8.77□□□□□ -1.01
FARP1-239ENST00000602171 ZNF341Q9BYN7 854 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.77□□□□□ -1.01
FARP1-239ENST00000602171 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 SWAP70Q9UH65 585 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 SAP30BPQ9UHR5 308 aaKnown RBP8.77□□□□□ -1.01
FARP1-239ENST00000602171 PALD1Q9ULE6 856 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 SCAF8Q9UPN6 1271 aaKnown RBP8.77□□□□□ -1.01
FARP1-239ENST00000602171 TRIM33Q9UPN9 1127 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 PASKQ96RG2 1323 aa8.77□□□□□ -1.01
FARP1-239ENST00000602171 DDTLA6NHG4 134 aaPredicted RBP8.76□□□□□ -1.01
FARP1-239ENST00000602171 MINDY4BA8MYZ0 360 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 TRAF5O00463 557 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 ZNF213O14771 459 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 ALX3O95076 343 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 ATG7O95352 703 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 FGAP02671 866 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 PCP11498 1178 aaKnown RBP8.76□□□□□ -1.01
FARP1-239ENST00000602171 MAP3K11Q16584 847 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 C12orf60Q5U649 245 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 PRAMEF18Q5VWM3 479 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 METTL16Q86W50 562 aaKnown RBP8.76□□□□□ -1.01
FARP1-239ENST00000602171 ZFPM1Q8IX07 1006 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 CCDC82Q8N4S0 544 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 RNF41Q9H4P4 317 aaPredicted RBP8.76□□□□□ -1.01
FARP1-239ENST00000602171 GBA2Q9HCG7 927 aaPredicted RBP8.76□□□□□ -1.01
FARP1-239ENST00000602171 GINM1Q9NU53 330 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 CSADQ9Y600 493 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 MYH7P12883 1935 aa8.76□□□□□ -1.01
FARP1-239ENST00000602171 ECM29Q5VYK3 1845 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 GLB1P16278 677 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 MCCP23508 829 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 SCNN1AP37088 669 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 PLCD1P51178 756 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 PPARAQ07869 468 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 VPS53Q5VIR6 699 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 MIGA2Q7L4E1 593 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 ANKRD13AQ8IZ07 590 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 MAP4K1Q92918 833 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 KRTAP9-2Q9BYQ4 174 aa8.75□□□□□ -1.01
FARP1-239ENST00000602171 CEP41Q9BYV8 373 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms