RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CCND2P30279 289 aa22.83■■□□□ 1.25
SHKBP1-222ENST00000600320 MFSD14CQ5VZR4 134 aa22.83■■□□□ 1.25
SHKBP1-222ENST00000600320 FERMT3Q86UX7 667 aa22.83■■□□□ 1.25
SHKBP1-222ENST00000600320 FBXO16Q8IX29 292 aaPredicted RBP22.83■■□□□ 1.25
SHKBP1-222ENST00000600320 TRPV1Q8NER1 839 aa22.83■■□□□ 1.25
SHKBP1-222ENST00000600320 CYP3A4P08684 503 aa22.82■■□□□ 1.24
SHKBP1-222ENST00000600320 DDIT3P35638 169 aa22.82■■□□□ 1.24
SHKBP1-222ENST00000600320 RESTQ13127 1097 aa22.82■■□□□ 1.24
SHKBP1-222ENST00000600320 STXBP2Q15833 593 aa22.82■■□□□ 1.24
SHKBP1-222ENST00000600320 NOSTRINQ8IVI9 506 aa22.82■■□□□ 1.24
SHKBP1-222ENST00000600320 RTEL1Q9NZ71 1219 aa22.82■■□□□ 1.24
SHKBP1-222ENST00000600320 B4DLN1 442 aa22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 WNT7AO00755 349 aa22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 RGS20O76081 388 aa22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 INHAP05111 366 aa22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 ZNF865P0CJ78 1059 aaPredicted RBP22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 CACNB2Q08289 660 aaPredicted RBP22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 GNL2Q13823 731 aaKnown RBP22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 PKN2Q16513 984 aaKnown RBP22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 MPHOSPH6Q99547 160 aaKnown RBP22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 PDGFCQ9NRA1 345 aa22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 DAXXQ9UER7 740 aaPredicted RBP22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 UBIAD1Q9Y5Z9 338 aa22.81■■□□□ 1.24
SHKBP1-222ENST00000600320 EIF3JO75822 258 aaKnown RBP22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 TDP2O95551 362 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 CYBAP13498 195 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 ITGB5P18084 799 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 ACVR2BQ13705 512 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 MAP3K21Q5TCX8 1036 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 FOXD4L5Q5VV16 416 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 TAPT1Q6NXT6 567 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 XRRA1Q6P2D8 792 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 NEK8Q86SG6 692 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 CYP2W1Q8TAV3 490 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 FOXD4L4Q8WXT5 416 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 IPO9Q96P70 1041 aaKnown RBP22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 VTA1Q9NP79 307 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 ZHX1Q9UKY1 873 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 ZDHHC9Q9Y397 364 aa22.8■■□□□ 1.24
SHKBP1-222ENST00000600320 FAM86B1E9PN63 330 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 FAM86B2P0C5J1 330 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 PRKAR2AP13861 404 aaKnown RBP22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 CIITAP33076 1130 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 SEMA3FQ13275 785 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 MXRA8Q9BRK3 442 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 MCOLN1Q9GZU1 580 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 ABHD16BQ9H3Z7 469 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 CNPY2Q9Y2B0 182 aa22.79■■□□□ 1.24
SHKBP1-222ENST00000600320 CCND3P30281 292 aaPredicted RBP22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 USP11P51784 963 aa22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 LETM2Q2VYF4 491 aa22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 SLC9C1Q4G0N8 1177 aa22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 TMEM63BQ5T3F8 832 aa22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 SEPT14Q6ZU15 432 aa22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 INPP4AQ96PE3 977 aaPredicted RBP22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 WDR11Q9BZH6 1224 aa22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 JADE2Q9NQC1 790 aa22.78■■□□□ 1.24
SHKBP1-222ENST00000600320 IGLV3-22A0A075B6J6 115 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 RBM47A0AV96 593 aaKnown RBP22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 ARIH2O95376 493 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 BRD1O95696 1058 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 ZSCAN22P10073 491 aaPredicted RBP22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 ATP2B1P20020 1258 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 ZNF76P36508 570 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 ADCYAP1R1P41586 468 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 TOB1P50616 345 aaPredicted RBP22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 FAM173BQ6P4H8 233 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 MBOAT7Q96N66 472 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 NRBP1Q9UHY1 535 aa22.77■■□□□ 1.24
SHKBP1-222ENST00000600320 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 STAM2O75886 525 aa22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 ARP10275 920 aa22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 PTGS1P23219 599 aa22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 NBR1Q14596 966 aa22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 CEP55Q53EZ4 464 aa22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 LENG9Q96B70 501 aa22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 KIAA1217Q5T5P2 1943 aa22.76■■□□□ 1.23
SHKBP1-222ENST00000600320 CYP3A7-CYP3A51PA0A087WV96 503 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 MEIS1O00470 390 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 ADCY6O43306 1168 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 F13A1P00488 732 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 PDIA4P13667 645 aaKnown RBP22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 CYP3A7P24462 503 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 ICAM3P32942 547 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 MTFR1Q15390 333 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 CCDC144BQ3MJ40 725 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 PRR16Q569H4 304 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 CCDC62Q6P9F0 684 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 MOXD1Q6UVY6 613 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 BRAPQ7Z569 592 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 NLRX1Q86UT6 975 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 PLA2G4DQ86XP0 818 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 ARMC5Q96C12 935 aa22.75■■□□□ 1.23
SHKBP1-222ENST00000600320 SPATA31C2B4DYI2 1134 aa22.74■■□□□ 1.23
SHKBP1-222ENST00000600320 SLC37A4O43826 429 aa22.74■■□□□ 1.23
SHKBP1-222ENST00000600320 MYCP01106 439 aaPredicted RBP22.74■■□□□ 1.23
SHKBP1-222ENST00000600320 GNPTABQ3T906 1256 aa22.74■■□□□ 1.23
SHKBP1-222ENST00000600320 TTC38Q5R3I4 469 aa22.74■■□□□ 1.23
SHKBP1-222ENST00000600320 MYSM1Q5VVJ2 828 aa22.74■■□□□ 1.23
SHKBP1-222ENST00000600320 NIPA1Q7RTP0 329 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms